RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MESDQ14696 234 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PTGISQ16647 500 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 KIFAP3Q92845 792 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 USP40Q9NVE5 1235 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 MYO1FO00160 1098 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PLCB3Q01970 1234 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PDIA5Q14554 519 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 KDM7AQ6ZMT4 941 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 OR2W6PQ8NHA6 318 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 EHD4Q9H223 541 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■■■ 151.4
DNMT3A-202ENST00000321117 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 POTECB2RU33 542 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 BACH1O14867 736 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 LRRN2O75325 713 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 SUN1O94901 812 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 MMEP08473 750 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 KRT5P13647 590 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 ZBTB16Q05516 673 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 SLITRK6Q9H5Y7 841 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 RCCD1A6NED2 376 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM133BQ5BKY9 247 aaKnown RBP13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 USP38Q8NB14 1042 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 DAGLBQ8NCG7 672 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 KLHL14Q9P2G3 628 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 PTPN22Q9Y2R2 807 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 SNX24Q9Y343 169 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 SETD1AO15047 1707 aaKnown RBP13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 AFDNP55196 1824 aaKnown RBP13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 NTSR2O95665 410 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM107AO95990 144 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 CFBP00751 764 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 CAVIN3Q969G5 261 aa13.85□□□□□ -0.19
DNMT3A-202ENST00000321117 FRMD3A2A2Y4 597 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 CAMTA2O94983 1202 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 HSPA6P17066 643 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 VPS41P49754 854 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 LRIG3Q6UXM1 1119 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 APTXQ7Z2E3 356 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MICAL1Q8TDZ2 1067 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 ANKS1AQ92625 1134 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 HVCN1Q96D96 273 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MTMR8Q96EF0 704 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 GLI1P08151 1106 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 HDLBPQ00341 1268 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 TCP10Q12799 353 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 DRP2Q13474 957 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 DDX42Q86XP3 938 aaKnown RBP eCLIP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 IKBKGQ9Y6K9 419 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 TRIM37O94972 964 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MYL7Q01449 175 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 SFR1Q86XK3 245 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MYCBPAPQ8TBZ2 947 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 ABCB11O95342 1321 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 A0A087X0T9 212 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 LOC102724159A0A0B4J2E5 919 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 GAS7O60861 476 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 NEBLO76041 1014 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM228BP0C875 321 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 SLFN13Q68D06 897 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 IRF2BP1Q8IU81 584 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 UBXN6Q9BZV1 441 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 MAD2L2Q9UI95 211 aa13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
DNMT3A-202ENST00000321117 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 PCK1P35558 622 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 C6orf118Q5T5N4 469 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 FBXO33Q7Z6M2 555 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 TLR10Q9BXR5 811 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ISCUQ9H1K1 167 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 GAP43P17677 238 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 TBC1D1Q86TI0 1168 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 TSEN2Q8NCE0 465 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 KLHL29Q96CT2 875 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms