RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
CSPG4P2Y-201ENST00000306853 MKI67P46013 3256 aaKnown RBP12.4□□□□□ -0.42
CSPG4P2Y-201ENST00000306853 SCN5AQ14524 2016 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 H0YGN5 161 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ATG7O95352 703 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ZNF174Q15697 407 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TMEM266Q2M3C6 531 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PLPPR4Q7Z2D5 763 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 CCDC60Q8IWA6 550 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 AFAP1L1Q8TED9 768 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ATP6V0A1Q93050 837 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 GJA10Q969M2 543 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 GABBR1Q9UBS5 961 aa12.39□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 NRCAMQ92823 1304 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 IGSF9BQ9UPX0 1349 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 IGKV6D-21A0A0A0MT36 114 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 STX6O43752 255 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 DKC1O60832 514 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 OR52Z1P0C646 297 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SYT1P21579 422 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PCYT2Q99447 389 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TRIM43BA6NCK2 446 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 WNT7AO00755 349 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 HBP1O60381 514 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 CYP2C9P11712 490 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TXKP42681 527 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 IGBP1P78318 339 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 BFSP2Q13515 415 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 NBR1Q14596 966 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 GRIK4Q16099 956 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 CAGE1Q8TC20 777 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 HAS1Q92839 578 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TRIM43Q96BQ3 446 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 VAV3Q9UKW4 847 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 CEP131Q9UPN4 1083 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 COL1A2P08123 1366 aa12.37□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 LAD1O00515 517 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TIMP1P01033 207 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 OATP04181 439 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 MAGEA10P43363 369 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PRKCEQ02156 737 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PTK7Q13308 1070 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TRMT1LQ7Z2T5 733 aaKnown RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TMEM199Q8N511 208 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 BADQ92934 168 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 NOC4LQ9BVI4 516 aaKnown RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TUBE1Q9UJT0 475 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PCDHB6Q9Y5E3 794 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 SIP14410 1827 aa12.36□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TREHO43280 583 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 BMP15O95972 392 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 INSRRP14616 1297 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 HOXC8P31273 242 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PSMC5P62195 406 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 FPGSQ05932 587 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 EPHA7Q15375 998 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 BANK1Q8NDB2 785 aa12.35□□□□□ -0.43
CSPG4P2Y-201ENST00000306853 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms