RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 IQCA1Q86XH1 822 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 RCAN3Q9UKA8 241 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 GCOM1H8Y6P7 765 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 POLR2MP0CAP2 368 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 STAG3L1P0CL83 205 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 HOXB8P17481 243 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 NDUFV1P49821 464 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 PDE1AP54750 535 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 FAM189BP81408 668 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 BTG3Q14201 252 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 RSPH3Q86UC2 560 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 NME8Q8N427 588 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 KLHL23Q8NBE8 558 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 POF1BQ8WVV4 589 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 RSPH1Q8WYR4 309 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 CPVLQ9H3G5 476 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 MLXIPQ9HAP2 919 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 PCDHA2Q9Y5H9 948 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 C5orf42Q9H799 3197 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 RRN3P2A6NIE6 340 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 CLCN5P51795 746 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 NMIQ13287 307 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 ASCL5Q7RTU5 278 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 KRT23Q9C075 422 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 TMX1Q9H3N1 280 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 BCAS3Q9H6U6 928 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 C1orf112Q9NSG2 853 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 CFBP00751 764 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-201ENST00000302278 NEK1Q96PY6 1258 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 RHOBTB2Q9BYZ6 727 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 CWH43Q9H720 699 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 RGS18Q9NS28 235 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 NR2E1Q9Y466 385 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 PCDHB15Q9Y5E8 787 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 TRPV2Q9Y5S1 764 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 CDY2AQ9Y6F7 541 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 COL1A2P08123 1366 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 PNMA6FA0A0J9YX94 578 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 MAFGO15525 162 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 GRIK4Q16099 956 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 SYCE2Q6PIF2 218 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 BORCS6Q96GS4 357 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 NECTIN4Q96NY8 510 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
ITGB1-201ENST00000302278 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 TLR9Q9NR96 1032 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 ERAP1Q9NZ08 941 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 ZSWIM5Q9P217 1185 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 NFASCO94856 1347 aa7.49□□□□□ -1.21
ITGB1-201ENST00000302278 IGKV6D-21A0A0A0MT36 114 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SMIM35A0A1B0GVV1 85 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 UPP2O95045 317 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 ATG7O95352 703 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CTSHP09668 335 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 NRIP1P48552 1158 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 TMEM105Q8N8V8 129 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CDHR1Q96JP9 859 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 BARX2Q9UMQ3 279 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SORCS3Q9UPU3 1222 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 UBIAD1Q9Y5Z9 338 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 ZNF213O14771 459 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CYTH3O43739 400 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 GHRP10912 638 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SCG2P13521 617 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CLUL1Q15846 466 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 RRP12Q5JTH9 1297 aaKnown RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 PLPPR4Q7Z2D5 763 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 COLGALT1Q8NBJ5 622 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 ATOH1Q92858 354 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SEMA4AQ9H3S1 761 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 TUBE1Q9UJT0 475 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 KLRF2D3W0D1 207 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 NOP56O00567 594 aaKnown RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 ITIH3Q06033 890 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 DSC3Q14574 896 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 ASTLQ6HA08 431 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 CHMP4CQ96CF2 233 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 PCYT2Q99447 389 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 MTA3Q9BTC8 594 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 SPZ1Q9BXG8 430 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 USTQ9Y2C2 406 aa7.48□□□□□ -1.21
ITGB1-201ENST00000302278 MTCL1Q9Y4B5 1905 aaKnown RBP7.48□□□□□ -1.21
ITGB1-201ENST00000302278 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-201ENST00000302278 MEIS2O14770 477 aa7.47□□□□□ -1.21
ITGB1-201ENST00000302278 KDM4AO75164 1064 aa7.47□□□□□ -1.21
ITGB1-201ENST00000302278 MYCLP12524 364 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-201ENST00000302278 PPFIA1Q13136 1202 aa7.47□□□□□ -1.21
ITGB1-201ENST00000302278 IER5Q5VY09 327 aa7.47□□□□□ -1.21
ITGB1-201ENST00000302278 CWF19L1Q69YN2 538 aaKnown RBP7.47□□□□□ -1.21
ITGB1-201ENST00000302278 SMARCAD1Q9H4L7 1026 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms