RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LENG9Q96B70 501 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 RIT2Q99578 217 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 UNC45AQ9H3U1 944 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 DISC1Q9NRI5 854 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 SETD4Q9NVD3 440 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 GABBR1Q9UBS5 961 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 TBX21Q9UL17 535 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 PCDHA10Q9Y5I2 948 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CENPFP49454 3210 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 UMODL1Q5DID0 1318 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 POTEB3A0JP26 581 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 HAS3O00219 553 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 KIAA0355O15063 1070 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 DHX15O43143 795 aaKnown RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 PSMD10O75832 226 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 TIMP1P01033 207 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 CD4P01730 458 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 CTSHP09668 335 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 THPOP40225 353 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 BFSP2Q13515 415 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 CUL4AQ13619 759 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 NBR1Q14596 966 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 GRIK4Q16099 956 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 POTEBQ6S5H4 581 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 DEFB128Q7Z7B8 93 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 SESTD1Q86VW0 696 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 BANK1Q8NDB2 785 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 ETNPPLQ8TBG4 499 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 LMBR1Q8WVP7 490 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 TRAPPC12Q8WVT3 735 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 SNX21Q969T3 373 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 SCLYQ96I15 445 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 FAM20AQ96MK3 541 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 CCDC43Q96MW1 224 aaKnown RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 FAM49AQ9H0Q0 323 aaPredicted RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 RNPEPQ9H4A4 650 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 SEPT9Q9UHD8 586 aaPredicted RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 TUBE1Q9UJT0 475 aa7.36□□□□□ -1.23
CD44-204ENST00000279452 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
CD44-204ENST00000279452 KIAA0100Q14667 2235 aaKnown RBP7.35□□□□□ -1.23
CD44-204ENST00000279452 NRCAMQ92823 1304 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 WNT7AO00755 349 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 TBX3O15119 743 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 TREHO43280 583 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 EDIL3O43854 480 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 LGR5O75473 907 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 OATP04181 439 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 OR52Z1P0C646 297 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 ACRP10323 421 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 INSRRP14616 1297 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 CSF2RAP15509 400 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 ITGB8P26012 769 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 SLC26A2P50443 739 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PRKCEQ02156 737 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 CYP4A11Q02928 519 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PTK7Q13308 1070 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PPIGQ13427 754 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD44-204ENST00000279452 PLCB4Q15147 1175 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 TMEM266Q2M3C6 531 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
CD44-204ENST00000279452 MFSD5Q6N075 450 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 ABHD15Q6UXT9 468 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 LRRC8DQ7L1W4 858 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PLPPR4Q7Z2D5 763 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 RSPH3Q86UC2 560 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 ATP8B4Q8TF62 1192 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 FOXD4L4Q8WXT5 416 aaPredicted RBP7.35□□□□□ -1.23
CD44-204ENST00000279452 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
CD44-204ENST00000279452 FAM167AQ96KS9 214 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 MBOAT7Q96N66 472 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PCYT2Q99447 389 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 FTOQ9C0B1 505 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD44-204ENST00000279452 TTC12Q9H892 705 aaPredicted RBP7.35□□□□□ -1.23
CD44-204ENST00000279452 KCNMB3Q9NPA1 279 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 PCDHA12Q9UN75 941 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 ALPK3Q96L96 1907 aa7.35□□□□□ -1.23
CD44-204ENST00000279452 BRCA2P51587 3418 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 DOCK5Q9H7D0 1870 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 IGSF9BQ9UPX0 1349 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 POTEMA6NI47 508 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 RRN3P2A6NIE6 340 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 DDX11L8A8MPP1 907 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 M0QZ92 97 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 HBP1O60381 514 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 DKC1O60832 514 aaKnown RBP eCLIP7.34□□□□□ -1.23
CD44-204ENST00000279452 ATG7O95352 703 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 SELPP16109 830 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 SYT1P21579 422 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 U2AF2P26368 475 aaKnown RBP eCLIP7.34□□□□□ -1.23
CD44-204ENST00000279452 TECP42680 631 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 TMEM62Q0P6H9 643 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 PPP2R5CQ13362 524 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 BECN1Q14457 450 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 HIC1Q14526 733 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 UGCGQ16739 394 aa7.34□□□□□ -1.23
CD44-204ENST00000279452 MTERF2Q49AM1 385 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms