RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GARSP41250 739 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 NSFP46459 744 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 PPP2R2AP63151 447 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ITGB3BPQ13352 177 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 DDB1Q16531 1140 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 AOC3Q16853 763 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 DBNLQ9UJU6 430 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 MKL2Q9ULH7 1088 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 PTGISQ16647 500 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 MAN2A1Q16706 1144 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ANKRD20A4Q4UJ75 823 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ANKRD20A8PQ5CZ79 823 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ANKRD20A2Q5SQ80 823 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ANKRD20A1Q5TYW2 823 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 GPR108Q9NPR9 543 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 FGFR1OP2Q9NVK5 253 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 C6orf203Q9P0P8 240 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 PCDHA12Q9UN75 941 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ZNF658Q5TYW1 1059 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 ABHD8Q96I13 439 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 FMO2Q99518 471 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 RABL2AQ9UBK7 228 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 CHD4Q14839 1912 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 HEXIM1O94992 359 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 TSPY1Q01534 308 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 NDUFA5Q16718 116 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 BRDTQ58F21 947 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 PDXDC1Q6P996 788 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 NACA2Q9H009 215 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 EPB41L5Q9HCM4 733 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 MRGBPQ9NV56 204 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ATP11BQ9Y2G3 1177 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 GMEB1Q9Y692 573 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 KRT8P05787 483 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 STAT2P52630 851 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 DPCR1Q3MIW9 517 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ARHGEF18Q6ZSZ5 1173 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 TTLL7Q6ZT98 887 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 OTUD6AQ7L8S5 288 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 U2AF1L4Q8WU68 220 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 FAM89AQ96GI7 184 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 RWDD2AQ9UIY3 292 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 PCDHA5Q9Y5H7 936 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 PLEKHG1Q9ULL1 1385 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 H3BQF6 201 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 OCA2Q04671 838 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 DAB2IPQ5VWQ8 1189 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 RINT1Q6NUQ1 792 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 RSPH3Q86UC2 560 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 FAM133AQ8N9E0 248 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 LINC00301Q8NCQ3 95 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 NRBF2Q96F24 287 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ERVV-2B6SEH9 535 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 FESP07332 822 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 KRT3P12035 628 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 CNBD1Q8NA66 436 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 MAGOHBQ96A72 148 aaKnown RBP6.13□□□□□ -1.43
VCAN-201ENST00000265077 ZMYND12Q9H0C1 365 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 ETNK1Q9HBU6 452 aa6.13□□□□□ -1.43
VCAN-201ENST00000265077 RASGRF2O14827 1237 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 IFNB1P01574 187 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TUBA4AP68366 448 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ZBED6P86452 979 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 GPBP1Q86WP2 473 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TRIM50Q86XT4 487 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 NLRP7Q8WX94 980 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 LRRC59Q96AG4 307 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 CFAP36Q96G28 342 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CSRNP1Q96S65 589 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ABLIM1O14639 778 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 USP14P54578 494 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 KRT80Q6KB66 452 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CCDC189A1A4V9 331 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 MAPK13O15264 365 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TECP42680 631 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ADARP55265 1226 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 LRRC63Q05C16 580 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ADCY1Q08828 1119 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 BZW1Q7L1Q6 419 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 TRIML2Q8N7C3 387 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TSPAN18Q96SJ8 248 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 THAP9Q9H5L6 903 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 HDAC6Q9UBN7 1215 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ZBTB21Q9ULJ3 1066 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 RABL2BQ9UNT1 228 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CHD1O14646 1710 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ERVK-7P63135 1459 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 FMNL1O95466 1100 aaPredicted RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 EIF4A1P60842 406 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 WDR24Q96S15 920 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 PANK4Q9NVE7 773 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 RFX7Q2KHR2 1363 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms