RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 TGFB3P10600 412 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 SMPD1P17405 629 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 RPA1P27694 616 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 MDM2Q00987 491 aaPredicted RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 KRT76Q01546 638 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 MCM6Q14566 821 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 TTLL4Q14679 1199 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 CELF3Q5SZQ8 465 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 OLFML2BQ68BL8 750 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 DHX37Q8IY37 1157 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 IQUBQ8NA54 791 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 TRPV1Q8NER1 839 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 ERMNQ8TAM6 284 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 PIGOQ8TEQ8 1089 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 SCFD2Q8WU76 684 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 SENP7Q9BQF6 1050 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 ABHD16BQ9H3Z7 469 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 MYH9P35579 1960 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 GSTTP1A0A1W2PQM5 241 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 TMEM150BA6NC51 233 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 WDR64B1ANS9 1081 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 NEDD9Q14511 834 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 HYIQ5T013 277 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 ABHD15Q6UXT9 468 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 CCDC60Q8IWA6 550 aaPredicted RBP10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 CEP57L1Q8IYX8 460 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 MSL3Q8N5Y2 521 aaKnown RBP10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 ERO1AQ96HE7 468 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 LXNQ9BS40 222 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 BLZF1Q9H2G9 400 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 TCEAL9Q9UHQ7 104 aa10.9□□□□□ -0.66
SNRNP40-201ENST00000263694 ADCY3O60266 1144 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 SSBP05455 408 aaKnown RBP eCLIP10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 P4HBP07237 508 aaKnown RBP10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 JAK3P52333 1124 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 TNFAIP2Q03169 654 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 ARHGAP1Q07960 439 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 HAUS3Q68CZ6 603 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 ISM2Q6H9L7 571 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 KCNV1Q6PIU1 500 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 METTL7BQ6UX53 244 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 RAD54LQ92698 747 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 SPATA33Q96N06 139 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 PCYT2Q99447 389 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 POLD4Q9HCU8 107 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.67
SNRNP40-201ENST00000263694 KDM3AQ9Y4C1 1321 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 NPHP3-ACAD11A0A0J9YXS1 232 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 BIN1O00499 593 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 BACH1O14867 736 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 ZNF862O60290 1169 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 ATG7O95352 703 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 GH1P01241 217 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 PSAPP07602 524 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 SUPT20HL2P0C7V6 817 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 HOXD10P28358 340 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 SFNP31947 248 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 TCF7P36402 384 aaPredicted RBP10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 CACNB2Q08289 660 aaPredicted RBP10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 CUL4BQ13620 913 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 POSTNQ15063 836 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 UTP14CQ5TAP6 766 aaKnown RBP10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 MFSD14CQ5VZR4 134 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 IQSEC1Q6DN90 963 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 MIS18BP1Q6P0N0 1132 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 GIMAP8Q8ND71 665 aaPredicted RBP10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 RAET1EQ8TD07 263 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 GPR20Q99678 358 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 NT5C3AQ9H0P0 336 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 TUFT1Q9NNX1 390 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
SNRNP40-201ENST00000263694 MYMKA6NI61 221 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 DYNC1LI2O43237 492 aaPredicted RBP10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 PLA2G4BP0C869 781 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 CYBAP13498 195 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 ATP4AP20648 1035 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 CNGA1P29973 690 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 CCND3P30281 292 aaPredicted RBP10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 QARSP47897 775 aaKnown RBP10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 RAD51AP2Q09MP3 1159 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 SV2BQ7L1I2 683 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms