RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 PCDHA4Q9UN74 947 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 CAPN15O75808 1086 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 CA8P35219 290 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 POLR2FP61218 127 aaKnown RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TRIM14Q14142 442 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 CEP128Q6ZU80 1094 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 PHC3Q8NDX5 983 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 LRRC15Q8TF66 581 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 NAF1Q96HR8 494 aaKnown RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 PIGSQ96S52 555 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TMOD4Q9NZQ9 345 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 SPATA7Q9P0W8 599 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 WDR35Q9P2L0 1181 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 HGSO14964 777 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 CEP104O60308 925 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 SLC1A4P43007 532 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 ANKRD20A2Q5SQ80 823 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 ANKRD20A1Q5TYW2 823 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 ANKRD20A3Q5VUR7 823 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PREBQ9HCU5 417 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 HYOU1Q9Y4L1 999 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 LONP1P36776 959 aaKnown RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 AMPD2Q01433 879 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 ITPK1Q13572 414 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 UBE2SQ16763 222 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 KBTBD12Q3ZCT8 623 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 SNX29Q8TEQ0 813 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 FGD4Q96M96 766 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PCDHA6Q9UN73 950 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PCDHA8Q9Y5H6 950 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 NAT1P18440 290 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 EIF4BP23588 611 aaKnown RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 SLC16A2P36021 539 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 DDB1Q16531 1140 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 OR2W6PQ8NHA6 318 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 UHMK1Q8TAS1 419 aaKnown RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 P3H4Q92791 437 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 ZIM3Q96PE6 472 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 RBM12Q9NTZ6 932 aaKnown RBP15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PCMTD2Q9NV79 361 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 PANK4Q9NVE7 773 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 SUN2Q9UH99 717 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
SCARF1-201ENST00000263071 GOLGA6L10A0A0M3HER8 536 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF263O14978 683 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 E2F6O75461 281 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 MRPS35P82673 323 aaKnown RBP15.41■□□□□ 0.06
SCARF1-201ENST00000263071 GRIK5Q16478 980 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 CCDC92Q53HC0 331 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-201ENST00000263071 SPATA4Q8NEY3 305 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 NSUN4Q96CB9 384 aaKnown RBP15.41■□□□□ 0.06
SCARF1-201ENST00000263071 ADAMTS1Q9UHI8 967 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 CAPN11Q9UMQ6 739 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 NWD2Q9ULI1 1742 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 ABL2P42684 1182 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 DEUP1Q05D60 604 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 IKQ13123 557 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-201ENST00000263071 TMEM110Q86TL2 294 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 AP1M1Q9BXS5 423 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 VCXQ9H320 206 aa15.41■□□□□ 0.06
SCARF1-201ENST00000263071 TDP2O95551 362 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CYP11B2P19099 503 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CCND1P24385 295 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CARSP49589 748 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 EPHB4P54760 987 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 SV2BQ7L1I2 683 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CNBD1Q8NA66 436 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 AENQ8WTP8 325 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 PAIP2BQ9ULR5 123 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 MYH8P13535 1937 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ARFGEF2Q9Y6D5 1785 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 hCG_2014768A0A024R1R8 64 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 NPHP3-ACAD11A0A0J9YXS1 232 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 RPS8P62241 208 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 DDX42Q86XP3 938 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ANKS4BQ8N8V4 417 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF512BQ96KM6 892 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 NDST4Q9H3R1 872 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CYTH3O43739 400 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 DDAH1O94760 285 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 LDHBP07195 334 aaKnown RBP15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CCDC80Q76M96 950 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 CNKSR1Q969H4 720 aa15.4■□□□□ 0.06
SCARF1-201ENST00000263071 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms