RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 BANK1Q8NDB2 785 aa18.67■□□□□ 0.58
TVP23C-201ENST00000225576 NAP1L5Q96NT1 182 aaPredicted RBP18.67■□□□□ 0.58
TVP23C-201ENST00000225576 CTAGE1Q96RT6 745 aa18.67■□□□□ 0.58
TVP23C-201ENST00000225576 IMPACTQ9P2X3 320 aa18.67■□□□□ 0.58
TVP23C-201ENST00000225576 SAMM50Q9Y512 469 aa18.67■□□□□ 0.58
TVP23C-201ENST00000225576 PCDHA2Q9Y5H9 948 aa18.67■□□□□ 0.58
TVP23C-201ENST00000225576 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 LRRC10BA6NIK2 292 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 CCNE2O96020 404 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 CCNA1P78396 465 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 KCTD2Q14681 263 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 HSP90AA4PQ58FG1 418 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 HERC4Q5GLZ8 1057 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-201ENST00000225576 C1orf186Q6ZWK4 172 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 SMAP1Q8IYB5 467 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-201ENST00000225576 GPRC5AQ8NFJ5 357 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-201ENST00000225576 REEP2Q9BRK0 252 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 THAP9Q9H5L6 903 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
TVP23C-201ENST00000225576 TRIM49BA6NDI0 452 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 COBLO75128 1261 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 APTXQ7Z2E3 356 aaKnown RBP18.65■□□□□ 0.58
TVP23C-201ENST00000225576 C4orf19Q8IY42 314 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 TRIM47Q96LD4 638 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 MMP19Q99542 508 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 MPHOSPH6Q99547 160 aaKnown RBP18.65■□□□□ 0.58
TVP23C-201ENST00000225576 DUSP9Q99956 384 aaKnown RBP18.65■□□□□ 0.58
TVP23C-201ENST00000225576 RUSC1Q9BVN2 902 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 R3HDMLQ9H3Y0 253 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
TVP23C-201ENST00000225576 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 DBR1Q9UK59 544 aaKnown RBP18.65■□□□□ 0.58
TVP23C-201ENST00000225576 PCDHA10Q9Y5I2 948 aa18.65■□□□□ 0.58
TVP23C-201ENST00000225576 LOC102724159A0A0B4J2E5 919 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 A0A1B0GTH6 734 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 ZBTB39O15060 712 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 KIF20AO95235 890 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 PSMC5P62195 406 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 MKRN3Q13064 507 aaKnown RBP18.64■□□□□ 0.58
TVP23C-201ENST00000225576 NR1I3Q14994 352 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 PWP2Q15269 919 aaKnown RBP18.64■□□□□ 0.58
TVP23C-201ENST00000225576 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 ANKRD20A12PQ8NF67 263 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 SEMA6BQ9H3T3 888 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 MORF4L1Q9UBU8 362 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.58
TVP23C-201ENST00000225576 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.58
TVP23C-201ENST00000225576 GAP43P17677 238 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 PTGS1P23219 599 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 HUNKP57058 714 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
TVP23C-201ENST00000225576 LRRC63Q05C16 580 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 RAD51AP2Q09MP3 1159 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 FSTL1Q12841 308 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 CCDC144BQ3MJ40 725 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 TCP11X2Q5H9J9 407 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 CSGALNACT2Q8N6G5 542 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 SRRTQ9BXP5 876 aaKnown RBP18.64■□□□□ 0.57
TVP23C-201ENST00000225576 JPH1Q9HDC5 661 aaPredicted RBP18.64■□□□□ 0.57
TVP23C-201ENST00000225576 INTS13Q9NVM9 706 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
TVP23C-201ENST00000225576 SLC9A2Q9UBY0 812 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 ODF2LQ9ULJ1 636 aa18.64■□□□□ 0.57
TVP23C-201ENST00000225576 LCTP09848 1927 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 KCNJ18B7U540 433 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 DKC1O60832 514 aaKnown RBP eCLIP18.63■□□□□ 0.57
TVP23C-201ENST00000225576 TBCAO75347 108 aaKnown RBP18.63■□□□□ 0.57
TVP23C-201ENST00000225576 TGFB3P10600 412 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 GUCY2CP25092 1073 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 GSDMDP57764 484 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 KCNJ12Q14500 433 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 FILIP1LQ4L180 1135 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 IRF2BP1Q8IU81 584 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 VSTM4Q8IW00 320 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 FGD4Q96M96 766 aa18.63■□□□□ 0.57
TVP23C-201ENST00000225576 PARK7Q99497 189 aaKnown RBP18.63■□□□□ 0.57
TVP23C-201ENST00000225576 EEF1GP26641 437 aaKnown RBP18.62■□□□□ 0.57
TVP23C-201ENST00000225576 LRRC41Q15345 812 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 TMC6Q7Z403 805 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 FILIP1Q7Z7B0 1213 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 SFR1Q86XK3 245 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 FAM114A1Q8IWE2 563 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 GLIS3Q8NEA6 775 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 MORC4Q8TE76 937 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 PTPN18Q99952 460 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 PORCNQ9H237 461 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 ZHX3Q9H4I2 956 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 EFCC1Q9HA90 598 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 OLFML3Q9NRN5 406 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 ANKEF1Q9NU02 776 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 SEL1LQ9UBV2 794 aa18.62■□□□□ 0.57
TVP23C-201ENST00000225576 KIF3CO14782 793 aa18.61■□□□□ 0.57
TVP23C-201ENST00000225576 FAM13AO94988 1023 aa18.61■□□□□ 0.57
TVP23C-201ENST00000225576 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
TVP23C-201ENST00000225576 PGK2P07205 417 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms