RNA–Protein interactions for RNA: ENST00000222747.7

TSPAN12-201, Transcript of tetraspanin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN12, Length 2,798 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN12-201ENST00000222747 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L10C9JJH3 530 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 PSEN1P49768 467 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 PPP4R3AQ6IN85 833 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 CHUKO15111 745 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 RASSF9O75901 435 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 SMTNP53814 917 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 HLTFQ14527 1009 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 DDX25Q9UHL0 483 aaKnown RBP16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 TSKSQ9UJT2 592 aa16.06■□□□□ 0.16
TSPAN12-201ENST00000222747 PPEF1O14829 653 aaPredicted RBP16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 KLRC1P26715 233 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 QPCTQ16769 361 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 PTPROQ16827 1216 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 GIMAP7Q8NHV1 300 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 IQCDQ96DY2 449 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 COA1Q9GZY4 146 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 EMC10Q5UCC4 262 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 C6orf89Q6UWU4 347 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 SP8Q8IXZ3 490 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 WHAMMQ8TF30 809 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 FGFBP2Q9BYJ0 223 aa16.05■□□□□ 0.16
TSPAN12-201ENST00000222747 TLR2O60603 784 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 TMOD1P28289 359 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 HSPA9P38646 679 aaKnown RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 LRRC63Q05C16 580 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 NFIAQ12857 509 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CCDC121Q6ZUS5 278 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 DDX42Q86XP3 938 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CUL5Q93034 780 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CCDC114Q96M63 670 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 GOLGA6L10A6NI86 522 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ZBTB5O15062 677 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CHRM1P11229 460 aaPredicted RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 HSD17B3P37058 310 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ARID5AQ03989 594 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 COASYQ13057 564 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CCDC84Q86UT8 332 aaPredicted RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 MCM8Q9UJA3 840 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ABCB11O95342 1321 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ATP2C2O75185 946 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 MMP14P50281 582 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 KCNMA1Q12791 1236 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ZFPM1Q8IX07 1006 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 HAUS2Q9NVX0 235 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 DONSONQ9NYP3 566 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 CEP83Q9Y592 693 aa16.04■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 ECHS1P30084 290 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 UAP1Q16222 522 aaPredicted RBP16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 PREPLQ4J6C6 727 aaPredicted RBP16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 ZCWPW2Q504Y3 356 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 APOBEC3HQ6NTF7 200 aaKnown RBP16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 GOLPH3Q9H4A6 298 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 RNF14Q9UBS8 474 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 PCDHA12Q9UN75 941 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 SUGT1Q9Y2Z0 365 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
TSPAN12-201ENST00000222747 PSMD2Q13200 908 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms