RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Akap11E9Q777 1895 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tfcp2l1Q3UNW5 479 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Vmn1r209Q5NC97 312 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Actn1Q7TPR4 892 aaKnown RBP7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Dpp9Q8BVG4 862 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Apol9bQ8C7I4 310 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tmem132cQ8CEF9 1099 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Apol9aQ8VDU3 310 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tlr3Q99MB1 905 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ndst4Q9EQW8 872 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Acot3Q9QYR7 432 aa7.83□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ssc5dQ8BV57 1371 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Smyd5Q3TYX3 416 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Qrich1Q3UA37 777 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gzf1Q4VBD9 706 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Rps6kc1Q8BLK9 1056 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Morc2bQ8C5W4 1022 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Usp33Q8R5K2 909 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Lrrc2Q8VDB8 371 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ankrd49Q8VE42 238 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Fthl17aQ9DAX0 182 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gm3409A0A0G2JE67 319 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Apol11bE9PUZ0 337 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gm6588E9Q3K0 461 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tmem132bF7BAB2 1078 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Arhgap6O54834 987 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Psmc4P54775 418 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tlr7P58681 1050 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Samhd1Q60710 627 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Fam102bQ8BQS4 339 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 BcamQ9R069 622 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Tet3Q8BG87 1668 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Zfp142G5E869 1843 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Pax3P24610 479 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Psmc5P62196 406 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Nfe2Q07279 373 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Mum1l1Q4VA55 681 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Zcwpw1Q6IR42 630 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Lig4Q8BTF7 911 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Atg16l1Q8C0J2 607 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gbp5Q8CFB4 590 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 1700109H08RikQ9D9C0 210 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 AtrnQ9WU60 1428 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Mdh1bQ5F204 500 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Cacna2d2Q6PHS9 1154 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Bola2Q8BGS2 86 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Slc35g1Q8BY79 368 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Slc8a2Q8K596 921 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Trim59Q922Y2 403 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Dnajc12Q9R022 198 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 HdxQ14B70 692 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Acap3Q6NXL5 833 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Atp1a3Q6PIC6 1013 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 UvragQ8K245 698 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Utp11Q9CZJ1 253 aaKnown RBP7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gja10Q9WUS4 505 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 PtgdrP70263 357 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Npas2P97460 816 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Fhdc1Q3ULZ2 1149 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Fam228bQ497Q6 232 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Gtf3c4Q8BMQ2 817 aaKnown RBP7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ddx19bQ8BZY3 494 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Rabep2Q91WG2 554 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 MefvQ9JJ26 767 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 PigbQ9JJQ0 542 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Add3Q9QYB5 706 aaKnown RBP7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Nab2Q61127 525 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Dnajc8Q6NZB0 253 aaKnown RBP7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 L3mbtl3Q8BLB7 883 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Znrd1-asQ8R0E5 213 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 CacybpQ9CXW3 229 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 TcimQ9D915 106 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ttll10A4Q9F3 704 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Serpina16D3Z660 418 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 InhbaQ04998 424 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Slc30a9Q5IRJ6 567 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Dr1Q91WV0 176 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Cdca7lQ922M5 438 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Mfap3lQ9D3X9 409 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 EtfbQ9DCW4 255 aaKnown RBP7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Kif9Q9WV04 790 aa7.82□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ece1Q4PZA2 769 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Best2Q8BGM5 508 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Ugt1a5B2RT14 529 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Kpna6O35345 536 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 P4hbP09103 509 aaKnown RBP7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Sox5P35710 763 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Stat3P42227 770 aaKnown RBP7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Vta1Q9CR26 309 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Fam217aQ9D9W6 419 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Krt71Q9R0H5 524 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Kcnd2Q9Z0V2 630 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 PtprvP70289 1705 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Herc3A6H6S0 1050 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Rnf207Q3V3A7 635 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Oxr1Q4KMM3 866 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 MlphQ91V27 590 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Pcdhb21Q91V48 774 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Jph2Q9ET78 696 aa7.81□□□□□ -1.16
Scn3a-201ENSMUST00000066432 Rps6ka2Q9WUT3 733 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms