RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Dars2Q8BIP0 653 aa11.1□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Trim31Q8R0K2 507 aa11.1□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Emc3Q99KI3 261 aa11.1□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Thoc2B1AZI6 1594 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Atn1O35126 1175 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ctnnal1O88327 731 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ccnd1P25322 295 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 NfibP97863 570 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Zscan2Q07230 614 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Letm2Q7TNU7 480 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Plxnc1Q9QZC2 1574 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mug2P28666 1451 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Atg4a-psA0A0G2JFS9 396 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cdr2lA2A6T1 465 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Sgo2bJ3QMK1 1167 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pdha2P35487 391 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ccdc69Q3TCJ8 202 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Snx19Q6P4T1 997 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Atg4aQ8C9S8 396 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 4932429P05RikA2ADI4 785 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Prr29B1ARI9 187 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Gm3402K7N5P2 326 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Syne3Q4FZC9 975 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Polr2bQ8CFI7 1174 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Arfip2Q8K221 341 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 MmadhcQ99LS1 296 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ccdc194A0A140LIT1 234 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Psmc6P62334 389 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Glg1Q61543 1175 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Gucy2gQ6TL19 1100 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pank4Q80YV4 820 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Sde2Q8K1J5 448 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Creb3l3Q91XE9 479 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Smyd3Q9CWR2 428 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 C1qtnf1Q9QXP7 281 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Irs4Q9Z0Y7 1216 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Rab17P35292 214 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Srgap2Q91Z67 1071 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Erp44Q9D1Q6 406 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Dmrtc1Q9D9R7 182 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Top3bQ9Z321 862 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Sall3Q62255 1320 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Slc4a9E9PUP3 929 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cct7P80313 544 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 TbcdQ8BYA0 1196 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ttc14Q9CSP9 761 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ccdc22Q9JIG7 627 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Peg12Q9WVA7 283 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Atp2c2A7L9Z8 944 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Gm1661E9Q963 441 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Sult6b1P0CC03 303 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Trim56Q80VI1 734 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Trpm8Q8R4D5 1104 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Nmd3Q99L48 503 aaKnown RBP11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Trappc10Q3TLI0 1259 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Dmc1Q61880 340 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pdik1lQ8QZR7 341 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Tmed5Q9CXE7 229 aa11.09□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ftl1P29391 183 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Uhmk1P97343 419 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sfi1Q3UZY0 1216 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nek8Q91ZR4 698 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sugt1Q9CX34 336 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 PgdQ9DCD0 483 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc27a3O88561 667 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ets2P15037 468 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 ItkQ03526 625 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Zbtb45Q52KG4 520 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Fam163aQ8CAA5 168 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Adi1Q99JT9 179 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Timm50Q9D880 353 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 NuggcD3YWJ0 796 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Mylk4Q5SUV5 386 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Lcn3Q62471 182 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Zbtb7bQ64321 544 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 C2cd5Q7TPS5 1016 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Aldh3b1Q80VQ0 468 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc35c2Q8VCX2 364 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Orc1Q9Z1N2 840 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Esr2O08537 530 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 TsksO54887 585 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Csn1s1P19228 313 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 YarsQ91WQ3 528 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sdr42e1Q9D665 394 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 FliiQ9JJ28 1271 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 L3mbtl1A2A5N8 826 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Trim47Q8C0E3 641 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Klhl25Q8R2P1 589 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ttc30a1Q99J38 664 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Kif19Q99PT9 997 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Serpinb3bQ9D1Q5 387 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hormad1Q9D5T7 392 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc40a1Q9JHI9 570 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Mms22lB1AUR6 1238 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 BegainQ68EF6 600 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 CtifQ6PEE2 600 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tas2r124Q7M718 309 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Epsti1Q8VDI1 314 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 AvenQ9D9K3 342 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ddx21Q9JIK5 851 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms