RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Pde11aP0C1Q2 933 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Sult1e1P49891 295 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 HdgfP51859 237 aaKnown RBP9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cpa6Q5U901 438 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 SrmsQ62270 496 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Plekha6Q7TQG1 1173 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 TbataQ7TSD4 393 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vmn1r214Q8R279 367 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Uxs1Q91XL3 420 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Slc25a54B1AUS6 473 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cyth3O08967 399 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 MutP16332 748 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm5168Q4KL04 211 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Slc9c1Q6UJY2 1175 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Atg16l1Q8C0J2 607 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Adprhl2Q8CG72 370 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf8Q8VC56 488 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rfc5Q9D0F6 339 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Efhd1Q9D4J1 240 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Apba1B2RUJ5 842 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 2610008E11RikG3X964 669 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Irf3P70671 419 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rundc1Q0VDN7 615 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Esyt2Q3TZZ7 845 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tdrd5Q5VCS6 1040 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Esco1Q69Z69 843 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Snx8Q8CFD4 459 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cnot6lQ8VEG6 555 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Psmd14O35593 310 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Hspa8P63017 646 aaKnown RBP9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 CiitaP79621 1155 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tmprss15P97435 1069 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mphosph8Q3TYA6 858 aaKnown RBP9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trim58Q5NCC9 485 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trit1Q80UN9 467 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tmem11Q8BK08 190 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vps11Q91W86 941 aaKnown RBP9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 OoepQ9CWE6 164 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rtn3Q9ES97 964 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Msh5Q9QUM7 833 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 ReckQ9Z0J1 971 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm3371F7CQW8 167 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gja1P23242 382 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Runx1t1Q61909 577 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 NntQ61941 1086 aaKnown RBP9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 St18Q80TY4 1045 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Slc6a15Q8BG16 729 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Spata2Q8K004 515 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mapre2Q8R001 326 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mrpl46Q9EQI8 283 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mdm4O35618 489 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Scrn3Q3TMH2 418 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mier3Q3UHF3 551 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Itga6Q61739 1091 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 DbnlQ62418 436 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ncapg2Q6DFV1 1138 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Aldh3b1Q80VQ0 468 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Zfp617Q91WM0 559 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rabgef1Q9JM13 491 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mindy4b-psA0A1W2P7H6 457 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Olfr750E9Q0Z1 331 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Nptx2O70340 429 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 UrgcpQ5NCI0 926 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trak1Q6PD31 939 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Akt1s1Q9D1F4 257 aa9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Prpf4Q9DAW6 521 aaKnown RBP9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Psma5Q9Z2U1 241 aaKnown RBP9.65□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rad21l1A2AU37 552 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zbtb21E9Q444 1094 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mtx2O88441 263 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mxi1P50540 228 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ext2P70428 718 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mre11Q61216 706 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Serpinb3dQ6UKZ0 387 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Npas4Q8BGD7 802 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ptbp2Q91Z31 531 aaKnown RBP9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pik3ap1Q9EQ32 811 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Chrac1Q9JKP8 129 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ttc13A0A1L1SSC7 844 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Supt3B0QZW4 406 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Spata31d1dE9Q5W2 1247 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nedd9O35177 833 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pax7P47239 503 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tsga10Q6NY15 697 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tbc1d22bQ80VE5 505 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trim36Q80WG7 729 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Kctd6Q8BNL5 237 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Fam180aQ8BR21 173 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bag2Q91YN9 210 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dach2Q925Q8 634 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mtif3Q9CZD5 276 aa9.65□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Evi5lH3BKQ3 813 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Plin2P43883 425 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ctnnb1Q02248 781 aaKnown RBP9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rpusd2Q149F1 553 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Osbp2Q5QNQ6 908 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dnm3Q8BZ98 863 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pstpip2Q99M15 334 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Oxld1Q9CR10 201 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CsadQ9DBE0 493 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms