RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 E2f6O54917 272 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ifit1Q64282 463 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Naa35Q6PHQ8 725 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 NostrinQ6WKZ7 506 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Smg5Q6ZPY2 1017 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Eif4a3Q91VC3 411 aaKnown RBP17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cdk5rap2Q8K389 1822 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Sox5P35710 763 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Slc26a6Q8CIW6 758 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Vwa5aQ99KC8 793 aaKnown RBP17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rmi1Q9D4G9 616 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Speer4eK7N6S8 255 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ppp4r4Q8C0Y0 875 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Sugt1Q9CX34 336 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Krt34Q9D646 392 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gadd45gQ9Z111 159 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 FancaQ9JL70 1439 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Arhgap6O54834 987 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 EgfrQ01279 1210 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Creb3Q61817 404 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Serpina9Q9D7D2 418 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 CoasyQ9DBL7 563 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Adrm1Q9JKV1 407 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Zfp846G3X996 541 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 UrgcpQ5NCI0 926 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Slc39a6Q8C145 765 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Usp15Q8R5H1 981 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rnf112Q96DY5 654 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Zfp91Q62511 572 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ccdc159Q8C963 411 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Edc3Q8K2D3 508 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 HnmtQ91VF2 295 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Mfap3lQ9D3X9 409 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 HmcesQ8R1M0 353 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tceal1Q921P9 165 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Styxl1Q9DAR2 321 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gpaa1Q9WTK3 621 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Apobec2Q9WV35 224 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Aldh18a1Q9Z110 795 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Alox15P39654 663 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dcaf15Q6PFH3 600 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Trim62Q80V85 475 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Abi1Q8CBW3 481 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dach2Q925Q8 634 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gps1Q99LD4 471 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 ErmapQ9JLN5 566 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Hspa4lP48722 838 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ccdc185Q3V118 621 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 LzicQ8K3C3 190 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Med15Q924H2 789 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Orc4O88708 433 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cd3dP04235 173 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Mybl1P51960 751 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Spata17Q9D552 379 aa17.75■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 GartQ64737 1010 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Nme8Q715T0 586 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 DtnaQ9D2N4 746 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Adarb2Q9JI20 745 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Adamts12Q811B3 1600 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Apol6B7ZC55 329 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Aifm3Q3TY86 605 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Zbtb45Q52KG4 520 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Wdr60Q8C761 999 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tor1aip1Q921T2 595 aaKnown RBP17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Med21Q9CQ39 144 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rcan1Q9JHG6 198 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm28360A0A087WR25 190 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ttc13A0A1L1SSC7 844 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Edem3Q2HXL6 931 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Serpinb6Q60854 378 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 CenpuQ8C4M7 410 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pole3Q9JKP7 145 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Eif4a1P60843 406 aaKnown RBP17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Lrch1P62046 709 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 F13a1Q8BH61 732 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Snf8Q9CZ28 258 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Krt10P02535 570 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cops2P61202 443 aaKnown RBP17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 AsnsQ61024 561 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ric8bQ80XE1 520 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ccdc22Q9JIG7 627 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rims1Q99NE5 1463 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Exoc7O35250 697 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Fndc3aQ8BX90 1198 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Phf20l1Q8CCJ9 1013 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ccdc77Q9CZH8 489 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ndst4Q9EQW8 872 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Armc7Q3UJZ3 198 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tut1Q8R3F9 869 aa17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 HdlbpQ8VDJ3 1268 aaKnown RBP17.74■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 CntrlA2AL36 2334 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Fdx1P46656 188 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dclk2Q6PGN3 756 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ints9Q8K114 658 aaKnown RBP17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tspyl4Q8VD63 406 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pdxdc1Q99K01 787 aaKnown RBP17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cylc2B1AWN8 422 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Exoc4O35382 975 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 ScinQ60604 715 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 MlxiplQ99MZ3 864 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms