RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	MEP1	P40260	492 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	JEM1	P40358	645 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	REE1	P40893	198 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	SEC27	P41811	889 aa	Known RBP	2.42	□□□□□ -2.02
RSA1	YPL193W	GPD2	P41911	440 aa	Known RBP	2.42	□□□□□ -2.02
RSA1	YPL193W	LAM5	P43560	674 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	AAD10	P47182	288 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	YGR126W	P53274	230 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	VPS9	P54787	451 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	GTR1	Q00582	310 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	GYL1	Q04322	720 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	BUD22	Q04347	519 aa	Known RBP	2.42	□□□□□ -2.02
RSA1	YPL193W	RRP9	Q06506	573 aa	Known RBP	2.42	□□□□□ -2.02
RSA1	YPL193W	PLP2	Q12017	286 aa		2.42	□□□□□ -2.02
RSA1	YPL193W	LSP1	Q12230	341 aa	Known RBP	2.42	□□□□□ -2.02
RSA1	YPL193W	RSA4	P25382	515 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	RPL32	P38061	130 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	RXT2	P38255	430 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	SRP72	P38688	640 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	YJR154W	P47181	346 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	ZPR1	P53303	486 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	MEP3	P53390	489 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	TOF1	P53840	1238 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	MRPL19	P53875	158 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	VTI1	Q04338	217 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	YMR027W	Q04371	470 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	YDR341C	Q05506	607 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	PHO92	Q06390	306 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	THP3	Q12049	470 aa	Known RBP	2.41	□□□□□ -2.02
RSA1	YPL193W	SFI1	Q12369	946 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	SMC6	Q12749	1114 aa		2.41	□□□□□ -2.02
RSA1	YPL193W	RAD52	P06778	471 aa	Known RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	MAS1	P10507	462 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	CDC24	P11433	854 aa	Predicted RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	KGD1	P20967	1014 aa	Known RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	IMG1	P25626	169 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	HEL1	P36113	551 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	MRP21	P38175	177 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	YBL029W	P38201	376 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	LRP1	P38801	184 aa	Known RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	BNA1	P47096	177 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	DRN1	P53255	507 aa	Known RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	CAF40	P53829	373 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	CBK1	P53894	756 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	SLG1	P54867	378 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	COQ9	Q05779	260 aa		2.4	□□□□□ -2.03
RSA1	YPL193W	HSH49	Q99181	213 aa	Predicted RBP	2.4	□□□□□ -2.03
RSA1	YPL193W	SEM1	O94742	89 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	QCR6	P00127	147 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	COX4	P04037	155 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	HAP2	P06774	265 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	DBF4	P32325	704 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	YBL055C	P34220	418 aa	Predicted RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	RSM22	P36056	628 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	CAB3	P36076	571 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	TCD2	P36101	447 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	NAT2	P37293	288 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	HMT1	P38074	348 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	DUG2	P38149	878 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	MAL33	P38157	468 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	RRF1	P38771	230 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	UTP9	P38882	575 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	POP2	P39008	433 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	CIN4	P39110	191 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	IRC6	P43615	237 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	BSC5	P53755	489 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	GOR1	P53839	350 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	MSC1	Q03104	513 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	TSA2	Q04120	196 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	TAF11	Q04226	346 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	SNO4	Q04902	237 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	HSP33	Q08914	237 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	PGC1	Q08959	321 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	HSP32	Q08992	237 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	NCE102	Q12207	173 aa	RIP-Chip data	2.39	□□□□□ -2.03	not detected
RSA1	YPL193W	WTM1	Q12363	437 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	CEX1	Q12453	761 aa		2.39	□□□□□ -2.03
RSA1	YPL193W	PGA3	Q12746	312 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	POL2	P21951	2222 aa	Known RBP	2.39	□□□□□ -2.03
RSA1	YPL193W	YBR056W-A	I2HB52	66 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	ILV1	P00927	576 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	STF1	P01098	86 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	MF(ALPHA)1	P01149	165 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	ATP1	P07251	545 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	PDX1	P16451	410 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	PET123	P17558	318 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	BRR2	P32639	2163 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.38	□□□□□ -2.03	not detected
RSA1	YPL193W	WWM1	P43582	211 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	ARC1	P46672	376 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	UPF3	P48412	387 aa	Known RBP	2.38	□□□□□ -2.03
RSA1	YPL193W	EFM6	P53970	246 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	YKU80	Q04437	629 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	AIM33	Q04516	312 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	YDR286C	Q05530	114 aa		2.38	□□□□□ -2.03
RSA1	YPL193W	AAC3	P18238	307 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	RPC53	P25441	422 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	YIH1	P25637	258 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	SDH3	P33421	198 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	YBR144C	P34215	104 aa		2.37	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms