RNA–Protein interactions for RNA: YPL027W

SMA1, Transcript of Protein of unknown function involved in prospore membrane assembly, yeast

Gene SMA1, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMA1	YPL027W	SNM1	P40993	198 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	PTR3	P43606	678 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	BNA3	P47039	444 aa	Known RBP	4.75	□□□□□ -1.65
SMA1	YPL027W	YGR067C	P53243	804 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	MRPL50	P53724	139 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	IST1	P53843	298 aa	Predicted RBP	4.75	□□□□□ -1.65
SMA1	YPL027W	YNL181W	P53878	407 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	IVY1	Q04934	453 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	CTS2	Q06350	511 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	GRS2	Q06817	618 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	SMC5	Q08204	1093 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	SRO7	Q12038	1033 aa		4.75	□□□□□ -1.65
SMA1	YPL027W	TDH2	P00358	332 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SMA1	YPL027W	RAD3	P06839	778 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	RPL27A	P0C2H6	136 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	RPL27B	P0C2H7	136 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	MAS1	P10507	462 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	RPL24B	P24000	155 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	YCP4	P25349	247 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	PUP3	P25451	205 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	PBN1	P25580	416 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	IMG1	P25626	169 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	ATP7	P30902	174 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	DEP1	P31385	405 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	RAD23	P32628	398 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	REC114	P32841	428 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	ECT1	P33412	323 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	MRPL10	P36520	322 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	AAP1	P37898	856 aa	Known RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	ICS2	P38284	255 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	ALP1	P38971	573 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	CDC40	P40968	455 aa	Predicted RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	TOS3	P43637	560 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	DPB11	P47027	764 aa	Predicted RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	CUS2	P53830	285 aa	Predicted RBP	4.74	□□□□□ -1.65
SMA1	YPL027W	ATG31	Q12421	196 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	SEY1	Q99287	776 aa		4.74	□□□□□ -1.65
SMA1	YPL027W	RHO2	P06781	192 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	ZRC1	P20107	442 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	KGD1	P20967	1014 aa	Known RBP	4.73	□□□□□ -1.65
SMA1	YPL027W	YSR3	P23501	404 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	HXT2	P23585	541 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	MGR1	P25573	417 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	GSY2	P27472	705 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	CWP1	P28319	239 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	YPS1	P32329	569 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	NTR2	P36118	322 aa	Predicted RBP	4.73	□□□□□ -1.65
SMA1	YPL027W	POP7	P38291	140 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	PRM9	P39551	298 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	TDA10	P42938	290 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	SNZ3	P43545	298 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	SWP82	P43554	623 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	HIT1	P46973	164 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	YGR079W	P53249	370 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	SNZ2	P53824	298 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	OCA2	P53949	197 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	ENT5	Q03769	411 aa	Known RBP	4.73	□□□□□ -1.65
SMA1	YPL027W	SPC2	Q04969	178 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	VPS74	Q06385	345 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	PAM18	Q07914	168 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	PEX27	Q08580	376 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	YDR262W	Q12331	272 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	PAA1	Q12447	191 aa	Known RBP	4.73	□□□□□ -1.65
SMA1	YPL027W	RRP12	Q12754	1228 aa	Known RBP	4.73	□□□□□ -1.65
SMA1	YPL027W	YER175W-A	Q8TGU4	54 aa		4.73	□□□□□ -1.65
SMA1	YPL027W	BI2	P03873	423 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	UTR1	P21373	530 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	DPB2	P24482	689 aa	Predicted RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	KRE2	P27809	442 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	PSO2	P30620	661 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	IMP3	P32899	183 aa	Predicted RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	SOF1	P33750	489 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	SPC97	P38863	823 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	YHR210C	P38893	341 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	PRP39	P39682	629 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	SEC72	P39742	193 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	SPG5	P42933	373 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	RPN11	P43588	306 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	MIG2	P53035	382 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	ROG1	P53118	685 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	LSG1	P53145	640 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	SSU72	P53538	206 aa	Predicted RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	TAF12	Q03761	539 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	YMR160W	Q03823	816 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	POS5	Q06892	414 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	NSE1	Q07913	336 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	RAX1	Q08760	435 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	SLF1	Q12034	447 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
SMA1	YPL027W	LSP1	Q12230	341 aa	Known RBP	4.72	□□□□□ -1.65
SMA1	YPL027W	RUP1	Q12242	671 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	INP53	Q12271	1107 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	NCB2	Q92317	146 aa		4.72	□□□□□ -1.65
SMA1	YPL027W	RAD7	P06779	565 aa		4.71	□□□□□ -1.66
SMA1	YPL027W	POL30	P15873	258 aa	Known RBP	4.71	□□□□□ -1.66
SMA1	YPL027W	CMK2	P22517	447 aa		4.71	□□□□□ -1.66
SMA1	YPL027W	GDA1	P32621	518 aa		4.71	□□□□□ -1.66
SMA1	YPL027W	FRE1	P32791	686 aa		4.71	□□□□□ -1.66
SMA1	YPL027W	LHS1	P36016	881 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms