RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W YCL049CP25577 312 aa3.88□□□□□ -1.79
CHL1YPL008W KRR1P25586 316 aaPredicted RBP3.88□□□□□ -1.79
CHL1YPL008W VMA6P32366 345 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W STE14P32584 239 aa3.88□□□□□ -1.79
CHL1YPL008W UTP11P34247 250 aaPredicted RBP3.88□□□□□ -1.79
CHL1YPL008W RMA1P36001 430 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W SWD1P39706 426 aa3.88□□□□□ -1.79
CHL1YPL008W NOP16P40007 231 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W TES1P41903 349 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W FAR7P43592 221 aa3.88□□□□□ -1.79
CHL1YPL008W BNA3P47039 444 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W PXR1P53335 271 aaPredicted RBP3.88□□□□□ -1.79
CHL1YPL008W PIR1Q03178 341 aa3.88□□□□□ -1.79
CHL1YPL008W YMR178WQ03219 274 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W YHM2Q04013 314 aa3.88□□□□□ -1.79
CHL1YPL008W VID22Q05934 901 aa3.88□□□□□ -1.79
CHL1YPL008W ARV1Q06541 321 aa3.88□□□□□ -1.79
CHL1YPL008W NSE1Q07913 336 aa3.88□□□□□ -1.79
CHL1YPL008W APC2Q12440 853 aa3.88□□□□□ -1.79
CHL1YPL008W SUC2P00724 532 aa3.88□□□□□ -1.79
CHL1YPL008W RAS2P01120 322 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W RAD7P06779 565 aa3.88□□□□□ -1.79
CHL1YPL008W REV1P12689 985 aa3.88□□□□□ -1.79
CHL1YPL008W SAM35P14693 329 aa3.88□□□□□ -1.79
CHL1YPL008W DPB2P24482 689 aaPredicted RBP3.88□□□□□ -1.79
CHL1YPL008W GBP2P25555 427 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CHL1YPL008W PEX34P25584 144 aa3.88□□□□□ -1.79
CHL1YPL008W CDC5P32562 705 aa3.88□□□□□ -1.79
CHL1YPL008W GIP4P39732 760 aa3.88□□□□□ -1.79
CHL1YPL008W RGI1P40043 161 aaPredicted RBP3.88□□□□□ -1.79
CHL1YPL008W YIR016WP40572 265 aa3.88□□□□□ -1.79
CHL1YPL008W PYK2P52489 506 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W MNT2P53059 558 aa3.88□□□□□ -1.79
CHL1YPL008W SWC4P53201 476 aa3.88□□□□□ -1.79
CHL1YPL008W ZRG17P53735 605 aa3.88□□□□□ -1.79
CHL1YPL008W RRN5Q02983 363 aa3.88□□□□□ -1.79
CHL1YPL008W RNH1Q04740 348 aa3.88□□□□□ -1.79
CHL1YPL008W DBP9Q06218 594 aaKnown RBP3.88□□□□□ -1.79
CHL1YPL008W GPI11Q06636 219 aa3.88□□□□□ -1.79
CHL1YPL008W YOR387CQ08910 206 aa3.88□□□□□ -1.79
CHL1YPL008W MED11Q99278 115 aa3.88□□□□□ -1.79
CHL1YPL008W Q0010Q9ZZX9 128 aa3.88□□□□□ -1.79
CHL1YPL008W REP1P03871 373 aa3.87□□□□□ -1.79
CHL1YPL008W LRG1P35688 1017 aa3.87□□□□□ -1.79
CHL1YPL008W PHO11P35842 467 aa3.87□□□□□ -1.79
CHL1YPL008W ALY1P36117 915 aa3.87□□□□□ -1.79
CHL1YPL008W RIB1P38066 345 aa3.87□□□□□ -1.79
CHL1YPL008W FES1P38260 290 aa3.87□□□□□ -1.79
CHL1YPL008W PHO12P38693 467 aa3.87□□□□□ -1.79
CHL1YPL008W DOT6P40059 670 aaKnown RBP3.87□□□□□ -1.79
CHL1YPL008W RTT105P40063 208 aa3.87□□□□□ -1.79
CHL1YPL008W YER158CP40095 573 aa3.87□□□□□ -1.79
CHL1YPL008W PAN6P40459 309 aa3.87□□□□□ -1.79
CHL1YPL008W GLG2P47011 380 aa3.87□□□□□ -1.79
CHL1YPL008W YJR149WP47177 404 aa3.87□□□□□ -1.79
CHL1YPL008W MRK1P50873 501 aa3.87□□□□□ -1.79
CHL1YPL008W YDR514CQ04408 483 aa3.87□□□□□ -1.79
CHL1YPL008W FMP42Q04991 504 aa3.87□□□□□ -1.79
CHL1YPL008W STP4Q07351 490 aa3.87□□□□□ -1.79
CHL1YPL008W LOT6Q07923 191 aa3.87□□□□□ -1.79
CHL1YPL008W RRT8Q08219 342 aa3.87□□□□□ -1.79
CHL1YPL008W THP1Q08231 455 aa3.87□□□□□ -1.79
CHL1YPL008W RSB1Q08417 382 aa3.87□□□□□ -1.79
CHL1YPL008W YPL191CQ08930 360 aa3.87□□□□□ -1.79
CHL1YPL008W NMD4Q12129 218 aa3.87□□□□□ -1.79
CHL1YPL008W HER1Q12276 1246 aa3.87□□□□□ -1.79
CHL1YPL008W RIB3Q99258 208 aa3.87□□□□□ -1.79
CHL1YPL008W TPK3P05986 398 aa3.87□□□□□ -1.79
CHL1YPL008W COR1P07256 457 aa3.87□□□□□ -1.79
CHL1YPL008W GAL3P13045 520 aa3.87□□□□□ -1.79
CHL1YPL008W CAD1P24813 409 aaKnown RBP3.87□□□□□ -1.79
CHL1YPL008W MRPL6P32904 214 aa3.87□□□□□ -1.79
CHL1YPL008W CCT6P39079 546 aa3.87□□□□□ -1.79
CHL1YPL008W YER010CP40011 234 aa3.87□□□□□ -1.79
CHL1YPL008W BNA2P47125 453 aa3.87□□□□□ -1.79
CHL1YPL008W YGR054WP53235 642 aaKnown RBP3.87□□□□□ -1.79
CHL1YPL008W YNL140CP53910 189 aa3.87□□□□□ -1.79
CHL1YPL008W COG5P53951 403 aa3.87□□□□□ -1.79
CHL1YPL008W PNG1Q02890 363 aa3.87□□□□□ -1.79
CHL1YPL008W YDR179W-AQ03983 463 aa3.87□□□□□ -1.79
CHL1YPL008W EMI2Q04409 500 aaKnown RBP3.87□□□□□ -1.79
CHL1YPL008W ARG7Q04728 441 aa3.87□□□□□ -1.79
CHL1YPL008W RPN5Q12250 445 aaKnown RBP3.87□□□□□ -1.79
CHL1YPL008W MDM35O60200 86 aa3.86□□□□□ -1.79
CHL1YPL008W ARF2P19146 181 aaKnown RBP3.86□□□□□ -1.79
CHL1YPL008W EPT1P22140 391 aa3.86□□□□□ -1.79
CHL1YPL008W PRP21P32524 280 aaPredicted RBP3.86□□□□□ -1.79
CHL1YPL008W RPT5P33297 434 aaKnown RBP3.86□□□□□ -1.79
CHL1YPL008W ECM4P36156 370 aa3.86□□□□□ -1.79
CHL1YPL008W YBR285WP38354 144 aa3.86□□□□□ -1.79
CHL1YPL008W STB2P46679 850 aa3.86□□□□□ -1.79
CHL1YPL008W AIM22P47051 409 aa3.86□□□□□ -1.79
CHL1YPL008W ATP22P50273 684 aaPredicted RBP3.86□□□□□ -1.79
CHL1YPL008W YGR015CP53208 328 aa3.86□□□□□ -1.79
CHL1YPL008W YNR071CP53757 342 aa3.86□□□□□ -1.79
CHL1YPL008W IMP4P53941 290 aaKnown RBP3.86□□□□□ -1.79
CHL1YPL008W YHC1Q05900 231 aaKnown RBP3.86□□□□□ -1.79
CHL1YPL008W UTP21Q06078 939 aaPredicted RBP3.86□□□□□ -1.79
CHL1YPL008W RGC1Q06108 1083 aaKnown RBP3.86□□□□□ -1.79
CHL1YPL008W YLR345WQ06137 509 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms