RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C ECM30Q06673 1274 aa2.5□□□□□ -2.01
DNL4YOR005C YIL002W-AQ3E7Z5 69 aa2.5□□□□□ -2.01
DNL4YOR005C YLR358CO13565 187 aa2.5□□□□□ -2.01
DNL4YOR005C PEP5P12868 1029 aa2.5□□□□□ -2.01
DNL4YOR005C LIP5P32875 414 aa2.5□□□□□ -2.01
DNL4YOR005C ECM4P36156 370 aa2.5□□□□□ -2.01
DNL4YOR005C ERG7P38604 731 aa2.5□□□□□ -2.01
DNL4YOR005C TDA11P38854 504 aa2.5□□□□□ -2.01
DNL4YOR005C SSO2P39926 295 aa2.5□□□□□ -2.01
DNL4YOR005C CIN1P40987 1014 aa2.5□□□□□ -2.01
DNL4YOR005C AGX1P43567 385 aa2.5□□□□□ -2.01
DNL4YOR005C TAF6P53040 516 aa2.5□□□□□ -2.01
DNL4YOR005C YGR266WP53326 701 aa2.5□□□□□ -2.01
DNL4YOR005C RET3P53600 189 aa2.5□□□□□ -2.01
DNL4YOR005C PRM1P53835 661 aa2.5□□□□□ -2.01
DNL4YOR005C KTR5P53966 522 aaPredicted RBP2.5□□□□□ -2.01
DNL4YOR005C RSM23Q01163 450 aa2.5□□□□□ -2.01
DNL4YOR005C MYO5Q04439 1219 aaKnown RBP2.5□□□□□ -2.01
DNL4YOR005C KAP95Q06142 861 aaKnown RBP2.5□□□□□ -2.01
DNL4YOR005C CUR1Q06469 252 aa2.5□□□□□ -2.01
DNL4YOR005C POS5Q06892 414 aa2.5□□□□□ -2.01
DNL4YOR005C OSW1Q08692 278 aa2.5□□□□□ -2.01
DNL4YOR005C LEU4P06208 619 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C GAL7P08431 366 aa2.49□□□□□ -2.01
DNL4YOR005C ERG11P10614 530 aa2.49□□□□□ -2.01
DNL4YOR005C MRP2P10663 115 aaPredicted RBP2.49□□□□□ -2.01
DNL4YOR005C SEC63P14906 663 aa2.49□□□□□ -2.01
DNL4YOR005C PMA2P19657 947 aa2.49□□□□□ -2.01
DNL4YOR005C TKL1P23254 680 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C CLB2P24869 491 aa2.49□□□□□ -2.01
DNL4YOR005C HRR25P29295 494 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C RIM1P32445 135 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C KAR9P32526 644 aa2.49□□□□□ -2.01
DNL4YOR005C SHP1P34223 423 aa2.49□□□□□ -2.01
DNL4YOR005C GLG1P36143 616 aa2.49□□□□□ -2.01
DNL4YOR005C SRL3P36167 246 aa2.49□□□□□ -2.01
DNL4YOR005C HSM3P38348 480 aa2.49□□□□□ -2.01
DNL4YOR005C MNN9P39107 395 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C PHO23P50947 330 aa2.49□□□□□ -2.01
DNL4YOR005C NUP84P52891 726 aa2.49□□□□□ -2.01
DNL4YOR005C YIP5P53108 310 aa2.49□□□□□ -2.01
DNL4YOR005C DRN1P53255 507 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C YGR126WP53274 230 aa2.49□□□□□ -2.01
DNL4YOR005C COS6P53344 381 aa2.49□□□□□ -2.01
DNL4YOR005C VIK1Q12045 647 aa2.49□□□□□ -2.01
DNL4YOR005C BUG1Q12191 341 aa2.49□□□□□ -2.01
DNL4YOR005C VPS63O13549 108 aa2.49□□□□□ -2.01
DNL4YOR005C RPL7AP05737 244 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C PDE2P06776 526 aa2.49□□□□□ -2.01
DNL4YOR005C RAP1P11938 827 aa2.49□□□□□ -2.01
DNL4YOR005C SAG1P20840 650 aa2.49□□□□□ -2.01
DNL4YOR005C BEM1P29366 551 aa2.49□□□□□ -2.01
DNL4YOR005C PMI40P29952 429 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C SAC1P32368 623 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C MIA40P36046 403 aa2.49□□□□□ -2.01
DNL4YOR005C VHC1P38329 1120 aa2.49□□□□□ -2.01
DNL4YOR005C TIF5P38431 405 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C BFR1P38934 470 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
DNL4YOR005C AIM20P40451 204 aa2.49□□□□□ -2.01
DNL4YOR005C NMD5P46970 1048 aa2.49□□□□□ -2.01
DNL4YOR005C ASN2P49090 572 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C PYK2P52489 506 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C MPS2P53159 387 aa2.49□□□□□ -2.01
DNL4YOR005C HOP2P53187 214 aa2.49□□□□□ -2.01
DNL4YOR005C YNL040WP53960 456 aaPredicted RBP2.49□□□□□ -2.01
DNL4YOR005C SRL4Q03085 281 aa2.49□□□□□ -2.01
DNL4YOR005C THI3Q07471 609 aa2.49□□□□□ -2.01
DNL4YOR005C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
DNL4YOR005C AIM39Q08223 395 aa2.49□□□□□ -2.01
DNL4YOR005C YOL075CQ08234 1294 aa2.49□□□□□ -2.01
DNL4YOR005C YOR365CQ08844 703 aa2.49□□□□□ -2.01
DNL4YOR005C MSH5Q12175 901 aa2.49□□□□□ -2.01
DNL4YOR005C RPL7BQ12213 244 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C SUT2Q12286 268 aa2.49□□□□□ -2.01
DNL4YOR005C MDM20Q12387 796 aaKnown RBP2.49□□□□□ -2.01
DNL4YOR005C RAD61Q99359 647 aa2.49□□□□□ -2.01
DNL4YOR005C NUM1Q00402 2748 aa2.48□□□□□ -2.01
DNL4YOR005C YRF1-3P0CX14 1859 aa2.48□□□□□ -2.01
DNL4YOR005C YRF1-7P0CX15 1859 aa2.48□□□□□ -2.01
DNL4YOR005C YRF1-6P53819 1859 aa2.48□□□□□ -2.01
DNL4YOR005C ATP10P18496 279 aa2.48□□□□□ -2.01
DNL4YOR005C NUF2P33895 451 aa2.48□□□□□ -2.01
DNL4YOR005C YKR015CP36111 568 aa2.48□□□□□ -2.01
DNL4YOR005C YBR139WP38109 508 aa2.48□□□□□ -2.01
DNL4YOR005C SUL1P38359 859 aa2.48□□□□□ -2.01
DNL4YOR005C CBR1P38626 284 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C PCL5P38794 229 aa2.48□□□□□ -2.01
DNL4YOR005C PET100P38958 111 aa2.48□□□□□ -2.01
DNL4YOR005C CSM2P40465 213 aa2.48□□□□□ -2.01
DNL4YOR005C LYS20P48570 428 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C VMA10P48836 114 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C YTP1P53584 459 aa2.48□□□□□ -2.01
DNL4YOR005C YDR541CQ03049 344 aa2.48□□□□□ -2.01
DNL4YOR005C CSM3Q04659 317 aa2.48□□□□□ -2.01
DNL4YOR005C IPK1Q06667 281 aa2.48□□□□□ -2.01
DNL4YOR005C YLR413WQ06689 675 aa2.48□□□□□ -2.01
DNL4YOR005C RRT8Q08219 342 aa2.48□□□□□ -2.01
DNL4YOR005C YOL073CQ08232 322 aa2.48□□□□□ -2.01
DNL4YOR005C YOR389WQ08912 624 aa2.48□□□□□ -2.01
DNL4YOR005C RUP1Q12242 671 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms