RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W RRP36Q12481 300 aaPredicted RBP9.85□□□□□ -0.83
PRE6YOL038W SAC7P17121 654 aa9.84□□□□□ -0.83
PRE6YOL038W MCK1P21965 375 aaKnown RBP9.84□□□□□ -0.83
PRE6YOL038W NPP1P25353 742 aa9.84□□□□□ -0.83
PRE6YOL038W EMP70P32802 667 aa9.84□□□□□ -0.83
PRE6YOL038W DHR2P36009 735 aaPredicted RBP9.84□□□□□ -0.83
PRE6YOL038W FRE2P36033 711 aa9.84□□□□□ -0.83
PRE6YOL038W HSM3P38348 480 aa9.84□□□□□ -0.83
PRE6YOL038W TRR2P38816 342 aa9.84□□□□□ -0.83
PRE6YOL038W PAC1P39946 494 aaKnown RBP9.84□□□□□ -0.83
PRE6YOL038W AYR1P40471 297 aa9.84□□□□□ -0.83
PRE6YOL038W MRM2P53123 320 aa9.84□□□□□ -0.83
PRE6YOL038W SKI8Q02793 397 aaPredicted RBP9.84□□□□□ -0.83
PRE6YOL038W YPL071CQ02864 156 aa9.84□□□□□ -0.83
PRE6YOL038W YPL107WQ02873 248 aa9.84□□□□□ -0.83
PRE6YOL038W YOR365CQ08844 703 aa9.84□□□□□ -0.83
PRE6YOL038W REX3Q12090 404 aa9.84□□□□□ -0.83
PRE6YOL038W CAR1P00812 333 aaKnown RBP9.83□□□□□ -0.84
PRE6YOL038W RAS2P01120 322 aaKnown RBP9.83□□□□□ -0.84
PRE6YOL038W MDV1P47025 714 aa9.83□□□□□ -0.84
PRE6YOL038W YPL068CQ02749 293 aa9.83□□□□□ -0.84
PRE6YOL038W YHC1Q05900 231 aaKnown RBP9.83□□□□□ -0.84
PRE6YOL038W SEI1Q06058 285 aa9.83□□□□□ -0.84
PRE6YOL038W SNF8Q12483 233 aa9.83□□□□□ -0.84
PRE6YOL038W PAR32Q12515 295 aaKnown RBP9.83□□□□□ -0.84
PRE6YOL038W SEC16P48415 2195 aaKnown RBP9.82□□□□□ -0.84
PRE6YOL038W UNG1P12887 359 aa9.82□□□□□ -0.84
PRE6YOL038W OXP1P28273 1286 aa9.82□□□□□ -0.84
PRE6YOL038W TAT2P38967 592 aa9.82□□□□□ -0.84
PRE6YOL038W PBP1P53297 722 aaKnown RBP9.82□□□□□ -0.84
PRE6YOL038W SMA2Q04658 369 aa9.82□□□□□ -0.84
PRE6YOL038W YMR310CQ04867 317 aaPredicted RBP9.82□□□□□ -0.84
PRE6YOL038W YLR413WQ06689 675 aa9.82□□□□□ -0.84
PRE6YOL038W YPR091CQ06833 770 aa9.82□□□□□ -0.84
PRE6YOL038W YOL131WQ08270 108 aa9.82□□□□□ -0.84
PRE6YOL038W UAF30Q08747 228 aa9.82□□□□□ -0.84
PRE6YOL038W BSC1Q12140 328 aa9.82□□□□□ -0.84
PRE6YOL038W SKS1Q12505 502 aa9.82□□□□□ -0.84
PRE6YOL038W MRP13P12686 339 aa9.81□□□□□ -0.84
PRE6YOL038W CBS2P14905 389 aa9.81□□□□□ -0.84
PRE6YOL038W RPB5P20434 215 aa9.81□□□□□ -0.84
PRE6YOL038W GFD2P25370 566 aaKnown RBP9.81□□□□□ -0.84
PRE6YOL038W CTS1P29029 562 aa9.81□□□□□ -0.84
PRE6YOL038W MRE11P32829 692 aa9.81□□□□□ -0.84
PRE6YOL038W BET3P36149 193 aa9.81□□□□□ -0.84
PRE6YOL038W ALG3P38179 458 aa9.81□□□□□ -0.84
PRE6YOL038W ARN1P38731 627 aa9.81□□□□□ -0.84
PRE6YOL038W SEC26P41810 973 aaKnown RBP9.81□□□□□ -0.84
PRE6YOL038W SEH1P53011 349 aaKnown RBP9.81□□□□□ -0.84
PRE6YOL038W TAF6P53040 516 aa9.81□□□□□ -0.84
PRE6YOL038W SSA3P09435 649 aaKnown RBP9.8□□□□□ -0.84
PRE6YOL038W BAR1P12630 587 aa9.8□□□□□ -0.84
PRE6YOL038W PHO81P17442 1178 aa9.8□□□□□ -0.84
PRE6YOL038W AAC3P18238 307 aa9.8□□□□□ -0.84
PRE6YOL038W RPC19P28000 142 aaKnown RBP9.8□□□□□ -0.84
PRE6YOL038W NUD1P32336 851 aa9.8□□□□□ -0.84
PRE6YOL038W VPS41P38959 992 aa9.8□□□□□ -0.84
PRE6YOL038W CIN1P40987 1014 aa9.8□□□□□ -0.84
PRE6YOL038W ECO1P43605 281 aa9.8□□□□□ -0.84
PRE6YOL038W RPE1P46969 238 aa9.8□□□□□ -0.84
PRE6YOL038W ARI1P53111 347 aaKnown RBP9.8□□□□□ -0.84
PRE6YOL038W SGT1Q08446 395 aa9.8□□□□□ -0.84
PRE6YOL038W YKL033W-AQ86ZR7 236 aa9.8□□□□□ -0.84
PRE6YOL038W SAS5Q99314 248 aa9.8□□□□□ -0.84
PRE6YOL038W ATP4P05626 244 aa9.79□□□□□ -0.84
PRE6YOL038W RAP1P11938 827 aa9.79□□□□□ -0.84
PRE6YOL038W DAT1P13483 248 aaKnown RBP9.79□□□□□ -0.84
PRE6YOL038W SIP2P34164 415 aaKnown RBP9.79□□□□□ -0.84
PRE6YOL038W GLG1P36143 616 aa9.79□□□□□ -0.84
PRE6YOL038W IFA38P38286 347 aa9.79□□□□□ -0.84
PRE6YOL038W GRE3P38715 327 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
PRE6YOL038W YHR177WP38867 453 aa9.79□□□□□ -0.84
PRE6YOL038W LYS12P40495 371 aaKnown RBP9.79□□□□□ -0.84
PRE6YOL038W ROM1P53046 1155 aa9.79□□□□□ -0.84
PRE6YOL038W EFR3Q03653 782 aaKnown RBP9.79□□□□□ -0.84
PRE6YOL038W YMR010WQ03687 405 aa9.79□□□□□ -0.84
PRE6YOL038W GMC2Q06201 188 aa9.79□□□□□ -0.84
PRE6YOL038W YEH1Q07804 573 aa9.79□□□□□ -0.84
PRE6YOL038W PHO2P07269 559 aa9.78□□□□□ -0.84
PRE6YOL038W CDC10P25342 322 aaKnown RBP9.78□□□□□ -0.84
PRE6YOL038W HSP150P32478 413 aa9.78□□□□□ -0.84
PRE6YOL038W SCO2P38072 301 aa9.78□□□□□ -0.84
PRE6YOL038W QDR2P40474 542 aa9.78□□□□□ -0.84
PRE6YOL038W EMC2P47133 292 aaKnown RBP9.78□□□□□ -0.84
PRE6YOL038W IMA1P53051 589 aa9.78□□□□□ -0.84
PRE6YOL038W GOR1P53839 350 aa9.78□□□□□ -0.84
PRE6YOL038W CGI121Q03705 181 aaKnown RBP9.78□□□□□ -0.84
PRE6YOL038W YPR172WQ06608 200 aa9.78□□□□□ -0.84
PRE6YOL038W YLL007CQ07799 665 aa9.78□□□□□ -0.84
PRE6YOL038W MLH3Q12083 715 aa9.78□□□□□ -0.84
PRE6YOL038W DBP2P24783 546 aaKnown RBP9.77□□□□□ -0.85
PRE6YOL038W VPS51P36116 164 aa9.77□□□□□ -0.85
PRE6YOL038W FAA2P39518 744 aa9.77□□□□□ -0.85
PRE6YOL038W DLD3P39976 496 aaKnown RBP9.77□□□□□ -0.85
PRE6YOL038W LAS21P40367 830 aa9.77□□□□□ -0.85
PRE6YOL038W RIC1P40395 1056 aa9.77□□□□□ -0.85
PRE6YOL038W YIL169CP40442 995 aa9.77□□□□□ -0.85
PRE6YOL038W PKP1P40530 394 aa9.77□□□□□ -0.85
PRE6YOL038W GAB1P41733 394 aa9.77□□□□□ -0.85
PRE6YOL038W RNR4P49723 345 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms