RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	TIR4	Q12218	487 aa	Predicted RBP	0.75	□□□□□ -2.29
YKU70	YMR284W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected
YKU70	YMR284W	CBS1	P14066	229 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	SEC63	P14906	663 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	CTR86	P25355	563 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	PHA2	P32452	334 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	CST26	P38226	397 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	GAT2	P40209	560 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	ESL1	P40456	1118 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	DOT5	P40553	215 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	HAC1	P41546	238 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	RPL21A	Q02753	160 aa	Known RBP	0.74	□□□□□ -2.29
YKU70	YMR284W	OAZ1	Q02803	292 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	ECM7	Q06200	448 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	RCN2	Q12044	265 aa		0.74	□□□□□ -2.29
YKU70	YMR284W	RPL21B	Q12672	160 aa	Known RBP	0.74	□□□□□ -2.29
YKU70	YMR284W	RPS19A	P07280	144 aa	Known RBP	0.73	□□□□□ -2.29
YKU70	YMR284W	RPS19B	P07281	144 aa	Predicted RBP	0.73	□□□□□ -2.29
YKU70	YMR284W	SIN4	P32259	974 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	SKI8	Q02793	397 aa	Predicted RBP	0.73	□□□□□ -2.29
YKU70	YMR284W	FOB1	O13329	566 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	CLN1	P20437	546 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	SKN1	P33336	771 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	MUD2	P36084	527 aa	Known RBP	0.73	□□□□□ -2.29
YKU70	YMR284W	FHL1	P39521	936 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	STB1	P42845	420 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	LCB3	P47013	409 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	AIM24	P47127	394 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	MEP3	P53390	489 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	MDM36	Q06820	579 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	RAX1	Q08760	435 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	YML133C	Q03099	1374 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	YLL067C	Q07888	1374 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	YLL066C	Q99208	1374 aa		0.73	□□□□□ -2.29
YKU70	YMR284W	RIP1	P08067	215 aa		0.72	□□□□□ -2.29
YKU70	YMR284W	DPH5	P32469	300 aa	Predicted RBP	0.72	□□□□□ -2.29
YKU70	YMR284W	YGP1	P38616	354 aa	Known RBP	0.72	□□□□□ -2.29
YKU70	YMR284W	YPT35	P38815	214 aa	Known RBP	0.72	□□□□□ -2.29
YKU70	YMR284W	YNL208W	P40159	199 aa	Known RBP	0.72	□□□□□ -2.29
YKU70	YMR284W	YIR035C	P40579	254 aa		0.72	□□□□□ -2.29
YKU70	YMR284W	CLD1	P53264	445 aa		0.72	□□□□□ -2.29
YKU70	YMR284W	TDA1	Q03533	586 aa		0.72	□□□□□ -2.29
YKU70	YMR284W	SRL2	Q12020	392 aa		0.72	□□□□□ -2.29
YKU70	YMR284W	SPS4	P09937	338 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YCL068C	P25593	260 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	DEP1	P31385	405 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	RRP1	P35178	278 aa	Predicted RBP	0.71	□□□□□ -2.3
YKU70	YMR284W	VHC1	P38329	1120 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YHK8	P38776	514 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	VTC2	P43585	828 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YJL144W	P47009	104 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YJR011C	P47086	261 aa	Predicted RBP	0.71	□□□□□ -2.3
YKU70	YMR284W	TWF1	P53250	332 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	HST4	P53688	370 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	GPI15	P53961	229 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	ATG16	Q03818	150 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	RRP9	Q06506	573 aa	Known RBP	0.71	□□□□□ -2.3
YKU70	YMR284W	SMC5	Q08204	1093 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	RIM20	Q12033	661 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YPR096C	O13587	100 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	YEF1	P32622	495 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	TFB1	P32776	642 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	COX13	P32799	129 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
YKU70	YMR284W	AST1	P35183	429 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	HEL1	P36113	551 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	RFC3	P38629	340 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	MAM33	P40513	266 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	MET28	P40573	187 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	CCE1	Q03702	353 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	EAF3	Q12432	401 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	CEX1	Q12453	761 aa		0.71	□□□□□ -2.3
YKU70	YMR284W	BEM2	P39960	2167 aa	Known RBP	0.7	□□□□□ -2.3
YKU70	YMR284W	GPH1	P06738	902 aa	Known RBP	0.7	□□□□□ -2.3
YKU70	YMR284W	SEC66	P33754	206 aa		0.7	□□□□□ -2.3
YKU70	YMR284W	YGR250C	P53316	781 aa	Known RBP	0.7	□□□□□ -2.3
YKU70	YMR284W	GIR2	Q03768	265 aa	Predicted RBP	0.7	□□□□□ -2.3
YKU70	YMR284W	TPT1	Q12272	230 aa	Known RBP	0.7	□□□□□ -2.3
YKU70	YMR284W	UTR5	P32630	166 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	PMT1	P33775	817 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	YEL057C	P39983	233 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	COQ5	P49017	307 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	VHT1	P53241	593 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	YMR018W	Q04364	514 aa		0.69	□□□□□ -2.3
YKU70	YMR284W	SCH9	P11792	824 aa	Known RBP	0.68	□□□□□ -2.3
YKU70	YMR284W	CMK2	P22517	447 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	CMC1	P36064	111 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	YAL037W	P39728	267 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	HXT14	P42833	540 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	ZRG17	P53735	605 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	RPT6	Q01939	405 aa	Known RBP	0.68	□□□□□ -2.3
YKU70	YMR284W	MET8	P15807	274 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	PPH22	P23595	377 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	SRB2	P34162	210 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	YJR008W	P47085	338 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	VPS75	P53853	264 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	GIP3	Q03016	1276 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	MDM30	Q05930	598 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	FAR10	Q06001	478 aa		0.68	□□□□□ -2.3
YKU70	YMR284W	OPY2	Q06810	360 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms