RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	EGD1	Q02642	157 aa	Known RBP	4.99	□□□□□ -1.61
SKG1	YKR100C	DPB4	Q04603	196 aa	Known RBP	4.99	□□□□□ -1.61
SKG1	YKR100C	OM45	P16547	393 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	SGV1	P23293	657 aa	Known RBP	4.98	□□□□□ -1.61
SKG1	YKR100C	KDX1	P36005	433 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	YNK1	P36010	153 aa	Known RBP	4.98	□□□□□ -1.61
SKG1	YKR100C	VHC1	P38329	1120 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	RPR2	P40571	144 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	YJL213W	P40896	331 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	RHO4	Q00246	291 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	SET6	Q12529	373 aa		4.98	□□□□□ -1.61
SKG1	YKR100C	URA4	P20051	364 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	MCK1	P21965	375 aa	Known RBP	4.97	□□□□□ -1.61
SKG1	YKR100C	SAS3	P34218	831 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	VPS24	P36095	224 aa	Known RBP	4.97	□□□□□ -1.61
SKG1	YKR100C	AVT5	P38176	459 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	SER3	P40054	469 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	COS10	P52924	374 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	COG7	P53195	279 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	RAD30	Q04049	632 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	YET2	Q04210	160 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	VMS1	Q04311	632 aa	Known RBP	4.97	□□□□□ -1.61
SKG1	YKR100C	SMD2	Q06217	110 aa	Known RBP	4.97	□□□□□ -1.61
SKG1	YKR100C	TCO89	Q08921	799 aa		4.97	□□□□□ -1.61
SKG1	YKR100C	ASP3-2	P0CX77	362 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	ASP3-3	P0CX78	362 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	ASP3-4	P0CX79	362 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	ASP3-1	P0CZ17	362 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	KGD1	P20967	1014 aa	Known RBP	4.96	□□□□□ -1.62
SKG1	YKR100C	BUD5	P25300	642 aa	Predicted RBP	4.96	□□□□□ -1.62
SKG1	YKR100C	PTR2	P32901	601 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	YKL100C	P34248	587 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	EBP2	P36049	427 aa	Known RBP	4.96	□□□□□ -1.62
SKG1	YKR100C	MAL33	P38157	468 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	RTS3	P53289	263 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	DUG3	P53871	357 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	YML131W	Q03102	365 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	PIR3	Q03180	325 aa		4.96	□□□□□ -1.62
SKG1	YKR100C	ERP1	Q05359	219 aa	Known RBP	4.96	□□□□□ -1.62
SKG1	YKR100C	CBS2	P14905	389 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	SPC110	P32380	944 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	PMT1	P33775	817 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	VPS52	P39904	641 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	PTR3	P43606	678 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	ARC1	P46672	376 aa	Known RBP	4.95	□□□□□ -1.62
SKG1	YKR100C	NBP35	P52920	328 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	BOR1	P53838	576 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	CSM3	Q04659	317 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	ETT1	Q08421	412 aa	Known RBP	4.95	□□□□□ -1.62
SKG1	YKR100C	YOR342C	Q12182	319 aa		4.95	□□□□□ -1.62
SKG1	YKR100C	FUM1	P08417	488 aa	Known RBP	4.94	□□□□□ -1.62
SKG1	YKR100C	RPC53	P25441	422 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	FRE1	P32791	686 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	FUI1	P38196	639 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	MTC4	P38335	694 aa	Known RBP	4.94	□□□□□ -1.62
SKG1	YKR100C	VAC7	P53950	1165 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	YNL040W	P53960	456 aa	Predicted RBP	4.94	□□□□□ -1.62
SKG1	YKR100C	EFM6	P53970	246 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	ATG10	Q07879	167 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	YLL056C	Q12177	298 aa		4.94	□□□□□ -1.62
SKG1	YKR100C	SAN1	P22470	610 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	NAM9	P27929	486 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	KRE6	P32486	720 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	NIP1	P32497	812 aa	Known RBP	4.93	□□□□□ -1.62
SKG1	YKR100C	YBL055C	P34220	418 aa	Predicted RBP	4.93	□□□□□ -1.62
SKG1	YKR100C	BUD32	P53323	261 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	TOF1	P53840	1238 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	MSC1	Q03104	513 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SKG1	YKR100C	AYT1	Q12226	474 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	YDR262W	Q12331	272 aa		4.93	□□□□□ -1.62
SKG1	YKR100C	CYR1	P08678	2026 aa	Known RBP	4.92	□□□□□ -1.62
SKG1	YKR100C	YIM1	P28625	365 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	CTM1	P38818	585 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	DPH1	P40487	425 aa	Known RBP	4.92	□□□□□ -1.62
SKG1	YKR100C	SNG1	P46950	547 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	BSC5	P53755	489 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	YSA1	Q01976	231 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	SHR3	Q02774	210 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	ELP3	Q02908	557 aa	Known RBP	4.92	□□□□□ -1.62
SKG1	YKR100C	YDL144C	Q07589	356 aa		4.92	□□□□□ -1.62
SKG1	YKR100C	ARD1	P07347	238 aa	Predicted RBP	4.91	□□□□□ -1.62
SKG1	YKR100C	PEP5	P12868	1029 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	BOS1	P25385	244 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	IMG1	P25626	169 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	AUR1	P36107	401 aa	Predicted RBP	4.91	□□□□□ -1.62
SKG1	YKR100C	ICS2	P38284	255 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	FAR3	P46671	204 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	YGR127W	P53275	312 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	RLI1	Q03195	608 aa	Known RBP	4.91	□□□□□ -1.62
SKG1	YKR100C	MDM30	Q05930	598 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	RAX1	Q08760	435 aa		4.91	□□□□□ -1.62
SKG1	YKR100C	HEM2	P05373	342 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	BCY1	P07278	416 aa	Known RBP	4.9	□□□□□ -1.63
SKG1	YKR100C	CHS1	P08004	1131 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	AMD1	P15274	810 aa	Known RBP	4.9	□□□□□ -1.63
SKG1	YKR100C	SNT1	P25357	1226 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	MRP4	P32902	394 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	RPL32	P38061	130 aa	Known RBP	4.9	□□□□□ -1.63
SKG1	YKR100C	CTK3	P46963	296 aa	Predicted RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms