RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	FAD1	P38913	306 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	VMA7	P39111	118 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	PFA3	P42836	336 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	CAF16	P43569	289 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	ALT2	P52892	507 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	CUE3	P53137	624 aa	Known RBP	3.32	□□□□□ -1.88
PEX1	YKL197C	YMR209C	Q03648	457 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	YDR179W-A	Q03983	463 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	TIF35	Q04067	274 aa	Known RBP	3.32	□□□□□ -1.88
PEX1	YKL197C	YDR387C	Q04162	555 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	ROY1	Q04847	553 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	YLR297W	Q05899	129 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	SCP1	Q08873	200 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	YLR053C	Q12026	108 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	EMP46	Q12396	444 aa		3.32	□□□□□ -1.88
PEX1	YKL197C	SNF3	P10870	884 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	CAF20	P12962	161 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	SIP2	P34164	415 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	DAD2	P36162	133 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	BIG1	P38813	335 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	RBG1	P39729	369 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	SSP120	P39931	234 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	ECM10	P39987	644 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	DSE1	P40077	573 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	RRT14	P40470	206 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	TOS3	P43637	560 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	SPC98	P53540	846 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YNL181W	P53878	407 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	CSN9	Q03981	162 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YMR074C	Q04773	145 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	RIB2	Q12362	591 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	YCL012C	Q8J0M4	134 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	ATP6	P00854	259 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	URA3	P03962	267 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	RPP2A	P05319	106 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	ILV2	P07342	687 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	MRP2	P10663	115 aa	Predicted RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	GUK1	P15454	187 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	SEC18	P18759	758 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	YIM1	P28625	365 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	CTS1	P29029	562 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YKU70	P32807	602 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YKL070W	P36087	169 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	SHM2	P37291	469 aa	Known RBP	3.31	□□□□□ -1.88
PEX1	YKL197C	EXO5	P38289	585 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YHR045W	P38775	560 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	AIM18	P38884	321 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	ALY2	P47029	1046 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	RPC17	P47076	161 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	TNA1	P53322	534 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	YIP3	P53633	176 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	CDD1	Q06549	142 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	ELG1	Q12050	791 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	GPM3	Q12326	303 aa		3.31	□□□□□ -1.88
PEX1	YKL197C	TRP4	P07285	380 aa	Predicted RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SGF29	P25554	259 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RPS5	P26783	225 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	HRR25	P29295	494 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SEC65	P29478	273 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	HEM12	P32347	362 aa	Predicted RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SPR1	P32603	445 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	CSG2	P35206	410 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	AIM29	P36154	155 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YCR087C-A	P37263	153 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	HSL7	P38274	827 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YHR202W	P38887	602 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	UIP3	P39547	235 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	EAF5	P39995	279 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SER3	P40054	469 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YMR147W	P40218	223 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	PDS1	P40316	373 aa	Predicted RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	CAB2	P40506	365 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	YFL052W	P43551	465 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	FMP32	P43557	207 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	EFM3	P47163	339 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SLD3	P53135	668 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	PNC1	P53184	216 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	YGR122W	P53272	402 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	MTQ1	P53944	314 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RPL6A	Q02326	176 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	PLB2	Q03674	706 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	EKI1	Q03764	534 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	ZEO1	Q08245	113 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	OSW1	Q08692	278 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RDR1	Q08904	546 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RUP1	Q12242	671 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	AGC1	Q12482	902 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	RPL6B	P05739	176 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SCH9	P11792	824 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	PEP5	P12868	1029 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SAC7	P17121	654 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	PRE7	P23724	241 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	FAA1	P30624	700 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	CCR4	P31384	837 aa	Known RBP	3.3	□□□□□ -1.88
PEX1	YKL197C	SPT14	P32363	452 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	ATP11	P32453	318 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	MAC1	P35192	417 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	TVP38	P36164	337 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	THI2	P38141	450 aa		3.3	□□□□□ -1.88
PEX1	YKL197C	SRO77	P38163	1010 aa		3.3	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms