RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W RBK1P25332 333 aa4.5□□□□□ -1.69
ABF1YKL112W CAP1P28495 268 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W TFC1P32367 649 aa4.5□□□□□ -1.69
ABF1YKL112W MVD1P32377 396 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W PDR3P33200 976 aa4.5□□□□□ -1.69
ABF1YKL112W YBL055CP34220 418 aaPredicted RBP4.5□□□□□ -1.69
ABF1YKL112W CSG2P35206 410 aa4.5□□□□□ -1.69
ABF1YKL112W AIM29P36154 155 aa4.5□□□□□ -1.69
ABF1YKL112W DTR1P38125 572 aa4.5□□□□□ -1.69
ABF1YKL112W YBR284WP38150 797 aa4.5□□□□□ -1.69
ABF1YKL112W FAD1P38913 306 aa4.5□□□□□ -1.69
ABF1YKL112W SMF1P38925 575 aa4.5□□□□□ -1.69
ABF1YKL112W CCT2P39076 527 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W RPN3P40016 523 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W PSA1P41940 361 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W YGR201CP42936 225 aa4.5□□□□□ -1.69
ABF1YKL112W PRM10P42946 383 aa4.5□□□□□ -1.69
ABF1YKL112W FAR7P43592 221 aa4.5□□□□□ -1.69
ABF1YKL112W SIP4P46954 829 aa4.5□□□□□ -1.69
ABF1YKL112W YJL132WP47014 750 aa4.5□□□□□ -1.69
ABF1YKL112W CTF18P49956 741 aa4.5□□□□□ -1.69
ABF1YKL112W MFM1Q02783 413 aa4.5□□□□□ -1.69
ABF1YKL112W PLM2Q04383 521 aa4.5□□□□□ -1.69
ABF1YKL112W RQC1Q05468 723 aaKnown RBP4.5□□□□□ -1.69
ABF1YKL112W SGT1Q08446 395 aa4.5□□□□□ -1.69
ABF1YKL112W YLR053CQ12026 108 aa4.5□□□□□ -1.69
ABF1YKL112W YPL066WQ12194 479 aa4.5□□□□□ -1.69
ABF1YKL112W FYV7Q12247 151 aa4.5□□□□□ -1.69
ABF1YKL112W AGC1Q12482 902 aa4.5□□□□□ -1.69
ABF1YKL112W SEC53P07283 254 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W MAS1P10507 462 aa4.49□□□□□ -1.69
ABF1YKL112W UGA1P17649 471 aa4.49□□□□□ -1.69
ABF1YKL112W IFM1P25038 676 aa4.49□□□□□ -1.69
ABF1YKL112W LAC1P28496 418 aa4.49□□□□□ -1.69
ABF1YKL112W NDI1P32340 513 aa4.49□□□□□ -1.69
ABF1YKL112W PRP21P32524 280 aaPredicted RBP4.49□□□□□ -1.69
ABF1YKL112W SOF1P33750 489 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W PIN4P34217 668 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
ABF1YKL112W DUG2P38149 878 aa4.49□□□□□ -1.69
ABF1YKL112W ECM8P38246 354 aa4.49□□□□□ -1.69
ABF1YKL112W ICS2P38284 255 aa4.49□□□□□ -1.69
ABF1YKL112W IMD2P38697 523 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W YMR147WP40218 223 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W HIT1P46973 164 aa4.49□□□□□ -1.69
ABF1YKL112W DBP6P53734 629 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W RPS15Q01855 142 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W YSA1Q01976 231 aa4.49□□□□□ -1.69
ABF1YKL112W EBS1Q03466 884 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W RIM13Q03792 727 aa4.49□□□□□ -1.69
ABF1YKL112W PPM1Q04081 328 aa4.49□□□□□ -1.69
ABF1YKL112W RGC1Q06108 1083 aaKnown RBP4.49□□□□□ -1.69
ABF1YKL112W SUE1Q06524 206 aa4.49□□□□□ -1.69
ABF1YKL112W HDA3Q06623 655 aa4.49□□□□□ -1.69
ABF1YKL112W ATG23Q06671 453 aa4.49□□□□□ -1.69
ABF1YKL112W FRE5Q08908 694 aa4.49□□□□□ -1.69
ABF1YKL112W PTC5Q12511 572 aa4.49□□□□□ -1.69
ABF1YKL112W PET20Q99373 253 aa4.49□□□□□ -1.69
ABF1YKL112W RPL6BP05739 176 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W RPS21AP0C0V8 87 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W HEM13P11353 328 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W CDC24P11433 854 aaPredicted RBP4.48□□□□□ -1.69
ABF1YKL112W NHP6AP11632 93 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W MEK1P24719 497 aaPredicted RBP4.48□□□□□ -1.69
ABF1YKL112W AFG1P32317 509 aa4.48□□□□□ -1.69
ABF1YKL112W RPS1AP33442 255 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W UTP20P35194 2493 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W SNU114P36048 1008 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W ANR2P36090 516 aaPredicted RBP4.48□□□□□ -1.69
ABF1YKL112W TAT1P38085 619 aa4.48□□□□□ -1.69
ABF1YKL112W ECM31P38122 312 aa4.48□□□□□ -1.69
ABF1YKL112W THI2P38141 450 aa4.48□□□□□ -1.69
ABF1YKL112W YBP1P38315 674 aa4.48□□□□□ -1.69
ABF1YKL112W YHL026CP38740 315 aa4.48□□□□□ -1.69
ABF1YKL112W HRB1P38922 454 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
ABF1YKL112W YEL057CP39983 233 aa4.48□□□□□ -1.69
ABF1YKL112W ECM10P39987 644 aa4.48□□□□□ -1.69
ABF1YKL112W EAF5P39995 279 aa4.48□□□□□ -1.69
ABF1YKL112W LSB3P43603 459 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W LSM8P47093 109 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W PAC10P48363 199 aa4.48□□□□□ -1.69
ABF1YKL112W TAD1P53065 400 aa4.48□□□□□ -1.69
ABF1YKL112W MRM2P53123 320 aa4.48□□□□□ -1.69
ABF1YKL112W RPL6AQ02326 176 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W ARX1Q03862 593 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W YMR226CQ05016 267 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W CDC123Q05791 360 aa4.48□□□□□ -1.69
ABF1YKL112W NEJ1Q06148 342 aa4.48□□□□□ -1.69
ABF1YKL112W YRA1Q12159 226 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W AFI1Q99222 893 aa4.48□□□□□ -1.69
ABF1YKL112W BRR2P32639 2163 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W RPP1BP10622 106 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W NHP6BP11633 99 aaKnown RBP4.48□□□□□ -1.69
ABF1YKL112W CWP1P28319 239 aa4.48□□□□□ -1.69
ABF1YKL112W KIP1P28742 1111 aa4.48□□□□□ -1.69
ABF1YKL112W MNS1P32906 549 aa4.48□□□□□ -1.69
ABF1YKL112W DOA1P36037 715 aa4.48□□□□□ -1.69
ABF1YKL112W SPC97P38863 823 aa4.48□□□□□ -1.69
ABF1YKL112W MSS4P38994 779 aa4.48□□□□□ -1.69
ABF1YKL112W YEL020CP39994 560 aa4.48□□□□□ -1.69
ABF1YKL112W RGI1P40043 161 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms