RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SSE2P32590 693 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C SUR1P33300 382 aa2.06□□□□□ -2.08
UFD4YKL010C ECM15P35195 104 aa2.06□□□□□ -2.08
UFD4YKL010C YBR138CP38277 524 aa2.06□□□□□ -2.08
UFD4YKL010C YHK8P38776 514 aa2.06□□□□□ -2.08
UFD4YKL010C NAB3P38996 802 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
UFD4YKL010C MET30P39014 640 aa2.06□□□□□ -2.08
UFD4YKL010C SSU1P41930 458 aa2.06□□□□□ -2.08
UFD4YKL010C SWP82P43554 623 aa2.06□□□□□ -2.08
UFD4YKL010C GYP8P43570 497 aa2.06□□□□□ -2.08
UFD4YKL010C RSC9Q03124 581 aa2.06□□□□□ -2.08
UFD4YKL010C YMR206WQ03695 313 aa2.06□□□□□ -2.08
UFD4YKL010C ARR1Q06596 294 aa2.06□□□□□ -2.08
UFD4YKL010C YOR289WQ12012 251 aaPredicted RBP2.06□□□□□ -2.08
UFD4YKL010C SRO7Q12038 1033 aa2.06□□□□□ -2.08
UFD4YKL010C REC8Q12188 680 aa2.06□□□□□ -2.08
UFD4YKL010C PSF1Q12488 208 aa2.06□□□□□ -2.08
UFD4YKL010C THP2O13539 261 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C MF(ALPHA)1P01149 165 aa2.05□□□□□ -2.08
UFD4YKL010C COX9P07255 59 aa2.05□□□□□ -2.08
UFD4YKL010C NHP6BP11633 99 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C VPS34P22543 875 aa2.05□□□□□ -2.08
UFD4YKL010C VMA3P25515 160 aa2.05□□□□□ -2.08
UFD4YKL010C YIM1P28625 365 aa2.05□□□□□ -2.08
UFD4YKL010C MAK5P38112 773 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C YPT35P38815 214 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C YEL073CP39974 107 aa2.05□□□□□ -2.08
UFD4YKL010C GDS1P41913 522 aa2.05□□□□□ -2.08
UFD4YKL010C RMD8P43620 662 aa2.05□□□□□ -2.08
UFD4YKL010C RPE1P46969 238 aa2.05□□□□□ -2.08
UFD4YKL010C UBC9P50623 157 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C SHE4P51534 789 aa2.05□□□□□ -2.08
UFD4YKL010C YSA1Q01976 231 aa2.05□□□□□ -2.08
UFD4YKL010C SKI8Q02793 397 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C OAZ1Q02803 292 aa2.05□□□□□ -2.08
UFD4YKL010C RPN4Q03465 531 aa2.05□□□□□ -2.08
UFD4YKL010C YML083CQ04526 418 aa2.05□□□□□ -2.08
UFD4YKL010C RKM1Q08961 583 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C RTC5Q12108 567 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C SFM1Q12314 213 aa2.05□□□□□ -2.08
UFD4YKL010C DCP1Q12517 231 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C MDM35O60200 86 aa2.05□□□□□ -2.08
UFD4YKL010C KIN2P13186 1147 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C ENA1P13587 1091 aa2.05□□□□□ -2.08
UFD4YKL010C DBP3P20447 523 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C DCC1P25559 380 aa2.05□□□□□ -2.08
UFD4YKL010C TFB1P32776 642 aa2.05□□□□□ -2.08
UFD4YKL010C SEC66P33754 206 aa2.05□□□□□ -2.08
UFD4YKL010C UIP5P36137 443 aa2.05□□□□□ -2.08
UFD4YKL010C YBR197CP38306 217 aa2.05□□□□□ -2.08
UFD4YKL010C TDP1P38319 544 aa2.05□□□□□ -2.08
UFD4YKL010C YAR028WP39548 234 aa2.05□□□□□ -2.08
UFD4YKL010C RGI1P40043 161 aaPredicted RBP2.05□□□□□ -2.08
UFD4YKL010C YIL161WP40449 235 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C TES1P41903 349 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C PRP24P49960 444 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C SPC105P53148 917 aa2.05□□□□□ -2.08
UFD4YKL010C MPC1P53157 130 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C YNR063WP53749 607 aa2.05□□□□□ -2.08
UFD4YKL010C YNL143CP53908 130 aa2.05□□□□□ -2.08
UFD4YKL010C ENA2Q01896 1091 aa2.05□□□□□ -2.08
UFD4YKL010C NOG1Q02892 647 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C PEX12Q04370 399 aa2.05□□□□□ -2.08
UFD4YKL010C GAD1Q04792 585 aa2.05□□□□□ -2.08
UFD4YKL010C NEJ1Q06148 342 aa2.05□□□□□ -2.08
UFD4YKL010C RIF2Q06208 395 aa2.05□□□□□ -2.08
UFD4YKL010C ENA5Q12691 1091 aa2.05□□□□□ -2.08
UFD4YKL010C PUT1P09368 476 aa2.05□□□□□ -2.08
UFD4YKL010C SCL1P21243 252 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C KIN3P22209 435 aa2.05□□□□□ -2.08
UFD4YKL010C SYN8P31377 255 aa2.05□□□□□ -2.08
UFD4YKL010C OAC1P32332 324 aa2.05□□□□□ -2.08
UFD4YKL010C SAC1P32368 623 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C HYM1P32464 399 aa2.05□□□□□ -2.08
UFD4YKL010C MRS6P32864 603 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C DOM34P33309 386 aa2.05□□□□□ -2.08
UFD4YKL010C TOD6P34219 525 aa2.05□□□□□ -2.08
UFD4YKL010C ASK1P35734 292 aa2.05□□□□□ -2.08
UFD4YKL010C COS111P38308 924 aa2.05□□□□□ -2.08
UFD4YKL010C WSC4P38739 605 aa2.05□□□□□ -2.08
UFD4YKL010C PRM10P42946 383 aa2.05□□□□□ -2.08
UFD4YKL010C FET5P43561 622 aa2.05□□□□□ -2.08
UFD4YKL010C AAD10P47182 288 aa2.05□□□□□ -2.08
UFD4YKL010C SAP4P53036 818 aa2.05□□□□□ -2.08
UFD4YKL010C PRM8P53174 237 aa2.05□□□□□ -2.08
UFD4YKL010C DOS2P54858 310 aa2.05□□□□□ -2.08
UFD4YKL010C REG1Q00816 1014 aa2.05□□□□□ -2.08
UFD4YKL010C SLU7Q02775 382 aaKnown RBP2.05□□□□□ -2.08
UFD4YKL010C ROT1Q03691 256 aa2.05□□□□□ -2.08
UFD4YKL010C SPO71Q03868 1245 aa2.05□□□□□ -2.08
UFD4YKL010C YDR514CQ04408 483 aa2.05□□□□□ -2.08
UFD4YKL010C YPR114WQ06107 315 aa2.05□□□□□ -2.08
UFD4YKL010C CRT10Q08226 957 aa2.05□□□□□ -2.08
UFD4YKL010C SOG2Q08817 791 aa2.05□□□□□ -2.08
UFD4YKL010C NFI1Q12216 726 aa2.05□□□□□ -2.08
UFD4YKL010C FRE6Q12473 712 aa2.05□□□□□ -2.08
UFD4YKL010C ALG7P07286 448 aa2.05□□□□□ -2.08
UFD4YKL010C SEC12P11655 471 aa2.05□□□□□ -2.08
UFD4YKL010C UNG1P12887 359 aa2.05□□□□□ -2.08
UFD4YKL010C THR1P17423 357 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms