RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C CLB3P24870 427 aa9.16□□□□□ -0.94
MET28YIR017C DPH5P32469 300 aaPredicted RBP9.16□□□□□ -0.94
MET28YIR017C PDX3P38075 228 aaKnown RBP9.16□□□□□ -0.94
MET28YIR017C ATG14P38270 344 aa9.16□□□□□ -0.94
MET28YIR017C LEU5P38702 357 aa9.16□□□□□ -0.94
MET28YIR017C LAS21P40367 830 aa9.16□□□□□ -0.94
MET28YIR017C SPG5P42933 373 aa9.16□□□□□ -0.94
MET28YIR017C STE24P47154 453 aa9.16□□□□□ -0.94
MET28YIR017C YGR016WP53209 190 aa9.16□□□□□ -0.94
MET28YIR017C ATF2P53296 535 aa9.16□□□□□ -0.94
MET28YIR017C YNR068CP53754 272 aa9.16□□□□□ -0.94
MET28YIR017C ERG13P54839 491 aaKnown RBP9.16□□□□□ -0.94
MET28YIR017C RHO4Q00246 291 aa9.16□□□□□ -0.94
MET28YIR017C TPP1Q03796 238 aa9.16□□□□□ -0.94
MET28YIR017C FDH1Q08911 376 aa9.16□□□□□ -0.94
MET28YIR017C YIL046W-AQ3E7Z4 54 aa9.16□□□□□ -0.94
MET28YIR017C MHF2Q3E829 80 aa9.16□□□□□ -0.94
MET28YIR017C MDM12Q92328 271 aa9.16□□□□□ -0.94
MET28YIR017C RAD7P06779 565 aa9.15□□□□□ -0.94
MET28YIR017C CMK2P22517 447 aa9.15□□□□□ -0.94
MET28YIR017C KAP122P32767 1081 aa9.15□□□□□ -0.94
MET28YIR017C MSN2P33748 704 aa9.15□□□□□ -0.94
MET28YIR017C SKG1P36169 355 aa9.15□□□□□ -0.94
MET28YIR017C YHR177WP38867 453 aa9.15□□□□□ -0.94
MET28YIR017C TPA1P40032 644 aaKnown RBP9.15□□□□□ -0.94
MET28YIR017C FAU1P40099 211 aa9.15□□□□□ -0.94
MET28YIR017C YJL068CP40363 299 aa9.15□□□□□ -0.94
MET28YIR017C ARF3P40994 183 aaRIP-Chip data9.15□□□□□ -0.94 RIP-Chip
MET28YIR017C YNL095CP53932 642 aa9.15□□□□□ -0.94
MET28YIR017C REC102Q02721 264 aa9.15□□□□□ -0.94
MET28YIR017C GPI11Q06636 219 aa9.15□□□□□ -0.94
MET28YIR017C THP1Q08231 455 aa9.15□□□□□ -0.94
MET28YIR017C SKS1Q12505 502 aa9.15□□□□□ -0.94
MET28YIR017C YOR019WQ99248 730 aa9.15□□□□□ -0.94
MET28YIR017C HTS1P07263 546 aaKnown RBP9.14□□□□□ -0.95
MET28YIR017C MER1P16523 270 aa9.14□□□□□ -0.95
MET28YIR017C STE4P18851 423 aa9.14□□□□□ -0.95
MET28YIR017C RPB5P20434 215 aa9.14□□□□□ -0.95
MET28YIR017C DBP3P20447 523 aaKnown RBP9.14□□□□□ -0.95
MET28YIR017C ARE1P25628 610 aa9.14□□□□□ -0.95
MET28YIR017C YBR241CP38142 488 aa9.14□□□□□ -0.95
MET28YIR017C UBS1P38290 277 aa9.14□□□□□ -0.95
MET28YIR017C YHL012WP38709 493 aa9.14□□□□□ -0.95
MET28YIR017C RBG1P39729 369 aa9.14□□□□□ -0.95
MET28YIR017C FMP52P40008 231 aa9.14□□□□□ -0.95
MET28YIR017C MDJ2P42834 146 aa9.14□□□□□ -0.95
MET28YIR017C RPS12P48589 143 aaKnown RBP9.14□□□□□ -0.95
MET28YIR017C UBC9P50623 157 aaPredicted RBP9.14□□□□□ -0.95
MET28YIR017C YGR266WP53326 701 aa9.14□□□□□ -0.95
MET28YIR017C ARR1Q06596 294 aa9.14□□□□□ -0.95
MET28YIR017C PFK27Q12471 397 aaPredicted RBP9.14□□□□□ -0.95
MET28YIR017C PUT2P07275 575 aa9.13□□□□□ -0.95
MET28YIR017C ZWF1P11412 505 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C ARP2P32381 391 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C RPS27AP35997 82 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C ZTA1P38230 334 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C TSL1P38427 1098 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C RPS27BP38711 82 aa9.13□□□□□ -0.95
MET28YIR017C RSP5P39940 809 aaKnown RBP9.13□□□□□ -0.95
MET28YIR017C FMP33P46998 180 aa9.13□□□□□ -0.95
MET28YIR017C ATP22P50273 684 aaPredicted RBP9.13□□□□□ -0.95
MET28YIR017C YMR310CQ04867 317 aaPredicted RBP9.13□□□□□ -0.95
MET28YIR017C RRT8Q08219 342 aa9.13□□□□□ -0.95
MET28YIR017C YAP1P19880 650 aaKnown RBP9.12□□□□□ -0.95
MET28YIR017C APN1P22936 367 aa9.12□□□□□ -0.95
MET28YIR017C RPS1BP23248 255 aaKnown RBP9.12□□□□□ -0.95
MET28YIR017C TEF4P36008 412 aaKnown RBP9.12□□□□□ -0.95
MET28YIR017C AUR1P36107 401 aaPredicted RBP9.12□□□□□ -0.95
MET28YIR017C BET3P36149 193 aa9.12□□□□□ -0.95
MET28YIR017C DLD3P39976 496 aaKnown RBP9.12□□□□□ -0.95
MET28YIR017C TED1P40533 473 aa9.12□□□□□ -0.95
MET28YIR017C CSL4P53859 292 aaPredicted RBP9.12□□□□□ -0.95
MET28YIR017C SNP1Q00916 300 aaPredicted RBP9.12□□□□□ -0.95
MET28YIR017C ELP4Q02884 456 aaKnown RBP9.12□□□□□ -0.95
MET28YIR017C SPO77Q06134 477 aa9.12□□□□□ -0.95
MET28YIR017C NDL1Q06568 189 aa9.12□□□□□ -0.95
MET28YIR017C PSY3Q12318 242 aa9.12□□□□□ -0.95
MET28YIR017C YDL199CQ12407 687 aa9.12□□□□□ -0.95
MET28YIR017C HOM3P10869 527 aa9.11□□□□□ -0.95
MET28YIR017C YAK1P14680 807 aa9.11□□□□□ -0.95
MET28YIR017C MXR2P25566 168 aa9.11□□□□□ -0.95
MET28YIR017C CDC3P32457 520 aaKnown RBP9.11□□□□□ -0.95
MET28YIR017C DCG1P32460 244 aa9.11□□□□□ -0.95
MET28YIR017C MKK1P32490 508 aa9.11□□□□□ -0.95
MET28YIR017C VPS51P36116 164 aa9.11□□□□□ -0.95
MET28YIR017C TRR2P38816 342 aa9.11□□□□□ -0.95
MET28YIR017C YHR210CP38893 341 aa9.11□□□□□ -0.95
MET28YIR017C VPS52P39904 641 aa9.11□□□□□ -0.95
MET28YIR017C QDR2P40474 542 aa9.11□□□□□ -0.95
MET28YIR017C HOS2P53096 452 aaPredicted RBP9.11□□□□□ -0.95
MET28YIR017C CDH1P53197 566 aa9.11□□□□□ -0.95
MET28YIR017C KRE28Q04431 385 aa9.11□□□□□ -0.95
MET28YIR017C VID22Q05934 901 aa9.11□□□□□ -0.95
MET28YIR017C DBP9Q06218 594 aaKnown RBP9.11□□□□□ -0.95
MET28YIR017C YPR172WQ06608 200 aa9.11□□□□□ -0.95
MET28YIR017C YPR091CQ06833 770 aa9.11□□□□□ -0.95
MET28YIR017C WTM1Q12363 437 aaKnown RBP9.11□□□□□ -0.95
MET28YIR017C CDC26P14724 124 aa9.1□□□□□ -0.95
MET28YIR017C URA4P20051 364 aa9.1□□□□□ -0.95
MET28YIR017C DMC1P25453 334 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms