RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MDM30Q05930 598 aa2.07□□□□□ -2.08
MSL1YIR009W SOR2Q07786 357 aa2.07□□□□□ -2.08
MSL1YIR009W MDY2Q12285 212 aa2.07□□□□□ -2.08
MSL1YIR009W YCL021W-AQ96VH3 125 aa2.07□□□□□ -2.08
MSL1YIR009W BRR1Q99177 341 aaPredicted RBP2.07□□□□□ -2.08
MSL1YIR009W RKR1Q04781 1562 aa2.06□□□□□ -2.08
MSL1YIR009W LEU4P06208 619 aaKnown RBP2.06□□□□□ -2.08
MSL1YIR009W STE3P06783 470 aa2.06□□□□□ -2.08
MSL1YIR009W RPC40P07703 335 aaKnown RBP2.06□□□□□ -2.08
MSL1YIR009W SCH9P11792 824 aaKnown RBP2.06□□□□□ -2.08
MSL1YIR009W AMD1P15274 810 aaKnown RBP2.06□□□□□ -2.08
MSL1YIR009W ALG1P16661 449 aa2.06□□□□□ -2.08
MSL1YIR009W KRE2P27809 442 aa2.06□□□□□ -2.08
MSL1YIR009W SIN4P32259 974 aa2.06□□□□□ -2.08
MSL1YIR009W PRP21P32524 280 aaPredicted RBP2.06□□□□□ -2.08
MSL1YIR009W ECM25P32525 599 aa2.06□□□□□ -2.08
MSL1YIR009W PTK1P36002 662 aaPredicted RBP2.06□□□□□ -2.08
MSL1YIR009W SPP381P38282 291 aaPredicted RBP2.06□□□□□ -2.08
MSL1YIR009W MLH1P38920 769 aa2.06□□□□□ -2.08
MSL1YIR009W ISC1P40015 477 aaKnown RBP2.06□□□□□ -2.08
MSL1YIR009W PCL7P40186 285 aa2.06□□□□□ -2.08
MSL1YIR009W NAS2P40555 220 aa2.06□□□□□ -2.08
MSL1YIR009W CHS6P40955 746 aa2.06□□□□□ -2.08
MSL1YIR009W SAS2P40963 338 aa2.06□□□□□ -2.08
MSL1YIR009W TFG2P41896 400 aaPredicted RBP2.06□□□□□ -2.08
MSL1YIR009W YJR154WP47181 346 aa2.06□□□□□ -2.08
MSL1YIR009W ABZ2Q03266 374 aa2.06□□□□□ -2.08
MSL1YIR009W RKM5Q12367 367 aa2.06□□□□□ -2.08
MSL1YIR009W RRD2Q12461 358 aa2.06□□□□□ -2.08
MSL1YIR009W COX3P00420 269 aa2.05□□□□□ -2.08
MSL1YIR009W CDC21P06785 304 aa2.05□□□□□ -2.08
MSL1YIR009W NFT1P0CE68 1218 aa2.05□□□□□ -2.08
MSL1YIR009W ATR1P13090 542 aa2.05□□□□□ -2.08
MSL1YIR009W UBA1P22515 1024 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W YCR022CP25620 114 aa2.05□□□□□ -2.08
MSL1YIR009W CRM1P30822 1084 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W YEL043WP32618 956 aa2.05□□□□□ -2.08
MSL1YIR009W FRE1P32791 686 aa2.05□□□□□ -2.08
MSL1YIR009W PMU1P36069 295 aa2.05□□□□□ -2.08
MSL1YIR009W KAP104P38217 918 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W GDT1P38301 280 aaPredicted RBP2.05□□□□□ -2.08
MSL1YIR009W GPI16P38875 610 aa2.05□□□□□ -2.08
MSL1YIR009W YER079WP40052 210 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W SCD6P45978 349 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
MSL1YIR009W GPI1P53306 609 aa2.05□□□□□ -2.08
MSL1YIR009W PDR16P53860 351 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W YNL143CP53908 130 aa2.05□□□□□ -2.08
MSL1YIR009W RLI1Q03195 608 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W SLD5Q03406 294 aa2.05□□□□□ -2.08
MSL1YIR009W NOP6Q07623 225 aaKnown RBP2.05□□□□□ -2.08
MSL1YIR009W HNT3Q08702 217 aa2.05□□□□□ -2.08
MSL1YIR009W YOR012WQ12351 137 aa2.05□□□□□ -2.08
MSL1YIR009W SUC2P00724 532 aa2.04□□□□□ -2.08
MSL1YIR009W SCEIP03882 235 aa2.04□□□□□ -2.08
MSL1YIR009W ILV5P06168 395 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W DST1P07273 309 aa2.04□□□□□ -2.08
MSL1YIR009W SEC63P14906 663 aa2.04□□□□□ -2.08
MSL1YIR009W TAL1P15019 335 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W GRR1P24814 1151 aa2.04□□□□□ -2.08
MSL1YIR009W BUB3P26449 341 aa2.04□□□□□ -2.08
MSL1YIR009W FAA1P30624 700 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W HXT1P32465 570 aa2.04□□□□□ -2.08
MSL1YIR009W CYS4P32582 507 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W YEL045CP32616 141 aa2.04□□□□□ -2.08
MSL1YIR009W UTR4P32626 227 aa2.04□□□□□ -2.08
MSL1YIR009W NRP1P32770 719 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
MSL1YIR009W YSC83P32792 385 aa2.04□□□□□ -2.08
MSL1YIR009W SUR1P33300 382 aa2.04□□□□□ -2.08
MSL1YIR009W FRE2P36033 711 aa2.04□□□□□ -2.08
MSL1YIR009W RSM22P36056 628 aa2.04□□□□□ -2.08
MSL1YIR009W OLA1P38219 394 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W OSH3P38713 996 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W RRF1P38771 230 aa2.04□□□□□ -2.08
MSL1YIR009W MTC6P38849 526 aa2.04□□□□□ -2.08
MSL1YIR009W CCT2P39076 527 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W TRS85P46944 698 aa2.04□□□□□ -2.08
MSL1YIR009W PHO86P46956 311 aa2.04□□□□□ -2.08
MSL1YIR009W YJR011CP47086 261 aaPredicted RBP2.04□□□□□ -2.08
MSL1YIR009W HMS2P47175 358 aa2.04□□□□□ -2.08
MSL1YIR009W SHE4P51534 789 aa2.04□□□□□ -2.08
MSL1YIR009W MSO1P53604 210 aaKnown RBP2.04□□□□□ -2.08
MSL1YIR009W HST1P53685 503 aa2.04□□□□□ -2.08
MSL1YIR009W PRM1P53835 661 aa2.04□□□□□ -2.08
MSL1YIR009W GIP3Q03016 1276 aa2.04□□□□□ -2.08
MSL1YIR009W SYO1Q07395 620 aa2.04□□□□□ -2.08
MSL1YIR009W YFH1Q07540 174 aa2.04□□□□□ -2.08
MSL1YIR009W REX4Q08237 289 aa2.04□□□□□ -2.08
MSL1YIR009W RKM1Q08961 583 aaPredicted RBP2.04□□□□□ -2.08
MSL1YIR009W YER078W-AQ3E7A2 54 aa2.04□□□□□ -2.08
MSL1YIR009W ADE4P04046 510 aaKnown RBP2.03□□□□□ -2.08
MSL1YIR009W OPI3P05375 206 aa2.03□□□□□ -2.08
MSL1YIR009W CHS1P08004 1131 aa2.03□□□□□ -2.08
MSL1YIR009W YCR041WP37265 110 aa2.03□□□□□ -2.08
MSL1YIR009W YBR056WP38081 501 aa2.03□□□□□ -2.08
MSL1YIR009W QDR3P38227 689 aa2.03□□□□□ -2.08
MSL1YIR009W RFS1P38234 210 aaKnown RBP2.03□□□□□ -2.08
MSL1YIR009W MSG5P38590 489 aa2.03□□□□□ -2.08
MSL1YIR009W RFC3P38629 340 aa2.03□□□□□ -2.08
MSL1YIR009W INM1P38710 295 aa2.03□□□□□ -2.08
MSL1YIR009W PTH1P38876 190 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms