RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C BTS1Q12051 335 aa4.14□□□□□ -1.75
SRB5YGR104C SFG1Q12507 346 aa4.14□□□□□ -1.75
SRB5YGR104C HIS3P06633 220 aa4.13□□□□□ -1.75
SRB5YGR104C HIP1P06775 603 aa4.13□□□□□ -1.75
SRB5YGR104C MATALPHA1P0CY06 175 aa4.13□□□□□ -1.75
SRB5YGR104C HMLALPHA1P0CY07 175 aa4.13□□□□□ -1.75
SRB5YGR104C GAL3P13045 520 aa4.13□□□□□ -1.75
SRB5YGR104C CDC10P25342 322 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C CTR86P25355 563 aa4.13□□□□□ -1.75
SRB5YGR104C PPA2P28239 310 aa4.13□□□□□ -1.75
SRB5YGR104C CWP1P28319 239 aa4.13□□□□□ -1.75
SRB5YGR104C ARP2P32381 391 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C IMP3P32899 183 aaPredicted RBP4.13□□□□□ -1.75
SRB5YGR104C YOX1P34161 385 aa4.13□□□□□ -1.75
SRB5YGR104C SWC5P38326 303 aa4.13□□□□□ -1.75
SRB5YGR104C SSH1P38353 490 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C END3P39013 349 aa4.13□□□□□ -1.75
SRB5YGR104C SER3P40054 469 aa4.13□□□□□ -1.75
SRB5YGR104C IST3P40565 148 aaPredicted RBP4.13□□□□□ -1.75
SRB5YGR104C BUD8P41698 603 aa4.13□□□□□ -1.75
SRB5YGR104C IRC7P43623 340 aa4.13□□□□□ -1.75
SRB5YGR104C AAD10P47182 288 aa4.13□□□□□ -1.75
SRB5YGR104C COG1P53079 417 aa4.13□□□□□ -1.75
SRB5YGR104C DBP6P53734 629 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C SQS1P53866 767 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C STP1Q00947 519 aa4.13□□□□□ -1.75
SRB5YGR104C NUP116Q02630 1113 aa4.13□□□□□ -1.75
SRB5YGR104C RCR2Q03446 210 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C USA1Q03714 838 aa4.13□□□□□ -1.75
SRB5YGR104C MYO5Q04439 1219 aaKnown RBP4.13□□□□□ -1.75
SRB5YGR104C APC4Q04601 652 aa4.13□□□□□ -1.75
SRB5YGR104C TRI1Q05024 226 aa4.13□□□□□ -1.75
SRB5YGR104C RRG8Q06109 277 aa4.13□□□□□ -1.75
SRB5YGR104C SYO1Q07395 620 aa4.13□□□□□ -1.75
SRB5YGR104C AAD4Q07747 329 aa4.13□□□□□ -1.75
SRB5YGR104C YEH1Q07804 573 aa4.13□□□□□ -1.75
SRB5YGR104C VAM3Q12241 283 aa4.13□□□□□ -1.75
SRB5YGR104C YDR262WQ12331 272 aa4.13□□□□□ -1.75
SRB5YGR104C RPL7AP05737 244 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C CDC33P07260 213 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C PEP5P12868 1029 aa4.12□□□□□ -1.75
SRB5YGR104C TUP1P16649 713 aa4.12□□□□□ -1.75
SRB5YGR104C SAG1P20840 650 aa4.12□□□□□ -1.75
SRB5YGR104C DBR1P24309 405 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C DAL2P25335 343 aa4.12□□□□□ -1.75
SRB5YGR104C RPC34P32910 317 aa4.12□□□□□ -1.75
SRB5YGR104C KES1P35844 434 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C DOA1P36037 715 aa4.12□□□□□ -1.75
SRB5YGR104C TUL1P36096 758 aa4.12□□□□□ -1.75
SRB5YGR104C OLA1P38219 394 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C URA8P38627 578 aaPredicted RBP4.12□□□□□ -1.75
SRB5YGR104C VAB2P40003 282 aa4.12□□□□□ -1.75
SRB5YGR104C YER121WP40076 114 aa4.12□□□□□ -1.75
SRB5YGR104C YMR147WP40218 223 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C CDC40P40968 455 aaPredicted RBP4.12□□□□□ -1.75
SRB5YGR104C UFE1P41834 346 aa4.12□□□□□ -1.75
SRB5YGR104C AGP3P43548 558 aa4.12□□□□□ -1.75
SRB5YGR104C YJL132WP47014 750 aa4.12□□□□□ -1.75
SRB5YGR104C YHC3P47040 408 aa4.12□□□□□ -1.75
SRB5YGR104C YJR154WP47181 346 aa4.12□□□□□ -1.75
SRB5YGR104C RIB4P50861 169 aaPredicted RBP4.12□□□□□ -1.75
SRB5YGR104C YGL204CP53089 101 aa4.12□□□□□ -1.75
SRB5YGR104C PEF1P53238 335 aa4.12□□□□□ -1.75
SRB5YGR104C SKI8Q02793 397 aaPredicted RBP4.12□□□□□ -1.75
SRB5YGR104C YOL019WQ08157 551 aa4.12□□□□□ -1.75
SRB5YGR104C RSA1Q08932 381 aa4.12□□□□□ -1.75
SRB5YGR104C CSM4Q08955 156 aa4.12□□□□□ -1.75
SRB5YGR104C LYS21Q12122 440 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C YRA1Q12159 226 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C RPL7BQ12213 244 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C DCP1Q12517 231 aaPredicted RBP4.12□□□□□ -1.75
SRB5YGR104C SET6Q12529 373 aa4.12□□□□□ -1.75
SRB5YGR104C TOP2P06786 1428 aaKnown RBP4.12□□□□□ -1.75
SRB5YGR104C RPS17AP02407 136 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C QCR2P07257 368 aa4.11□□□□□ -1.75
SRB5YGR104C TY2A-LR1P0C2J4 438 aa4.11□□□□□ -1.75
SRB5YGR104C TY2A-FP0CX61 438 aa4.11□□□□□ -1.75
SRB5YGR104C TY2A-GR2P0CX62 438 aa4.11□□□□□ -1.75
SRB5YGR104C SCH9P11792 824 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C REV1P12689 985 aa4.11□□□□□ -1.75
SRB5YGR104C RPS17BP14127 136 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C POL30P15873 258 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C CBF1P17106 351 aa4.11□□□□□ -1.75
SRB5YGR104C MET16P18408 261 aaPredicted RBP4.11□□□□□ -1.75
SRB5YGR104C TY2A-CP25383 438 aa4.11□□□□□ -1.75
SRB5YGR104C RPS5P26783 225 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C CNE1P27825 502 aa4.11□□□□□ -1.75
SRB5YGR104C PRE4P30657 266 aa4.11□□□□□ -1.75
SRB5YGR104C SPS19P32573 292 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C SNU114P36048 1008 aaKnown RBP4.11□□□□□ -1.75
SRB5YGR104C CMC1P36064 111 aa4.11□□□□□ -1.75
SRB5YGR104C DTR1P38125 572 aa4.11□□□□□ -1.75
SRB5YGR104C YHI9P38765 294 aa4.11□□□□□ -1.75
SRB5YGR104C LNP1P38878 278 aa4.11□□□□□ -1.75
SRB5YGR104C SLM1P40485 686 aa4.11□□□□□ -1.75
SRB5YGR104C SGN1P40561 250 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
SRB5YGR104C OPT1P40897 799 aa4.11□□□□□ -1.75
SRB5YGR104C RTS2P40962 232 aa4.11□□□□□ -1.75
SRB5YGR104C RTT101P47050 842 aa4.11□□□□□ -1.75
SRB5YGR104C VOA1P53262 265 aa4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms