RNA–Protein interactions for RNA: YGR056W

RSC1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC1, Length 2,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC1YGR056W KRE28Q04431 385 aa3.34□□□□□ -1.87
RSC1YGR056W CRR1Q05790 422 aa3.34□□□□□ -1.87
RSC1YGR056W YPR196WQ06595 470 aa3.34□□□□□ -1.87
RSC1YGR056W YLR049CQ12110 428 aa3.34□□□□□ -1.87
RSC1YGR056W RRP42Q12277 265 aaPredicted RBP3.34□□□□□ -1.87
RSC1YGR056W TRP3P00937 484 aa3.34□□□□□ -1.88
RSC1YGR056W GCD1P09032 578 aaPredicted RBP3.34□□□□□ -1.88
RSC1YGR056W COS2P0CX12 379 aa3.34□□□□□ -1.88
RSC1YGR056W COS3P0CX13 379 aa3.34□□□□□ -1.88
RSC1YGR056W PRP4P20053 465 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W SCL1P21243 252 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W ERG6P25087 383 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W FUN30P31380 1131 aa3.34□□□□□ -1.88
RSC1YGR056W NIP1P32497 812 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W MGM101P32787 269 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W RPT5P33297 434 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W TPA1P40032 644 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W FKH2P41813 862 aa3.34□□□□□ -1.88
RSC1YGR056W COS4P43542 379 aa3.34□□□□□ -1.88
RSC1YGR056W MET12P46151 657 aa3.34□□□□□ -1.88
RSC1YGR056W YJR030CP47101 745 aa3.34□□□□□ -1.88
RSC1YGR056W YJR149WP47177 404 aa3.34□□□□□ -1.88
RSC1YGR056W UPF3P48412 387 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W COS12P53053 380 aa3.34□□□□□ -1.88
RSC1YGR056W YGR015CP53208 328 aa3.34□□□□□ -1.88
RSC1YGR056W YAP1802P53309 568 aa3.34□□□□□ -1.88
RSC1YGR056W TNA1P53322 534 aa3.34□□□□□ -1.88
RSC1YGR056W YNL010WP53981 241 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W PRO2P54885 456 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W TY1A-NL1Q12391 440 aaKnown RBP3.34□□□□□ -1.88
RSC1YGR056W FMP27Q06179 2628 aa3.33□□□□□ -1.88
RSC1YGR056W MDM35O60200 86 aa3.33□□□□□ -1.88
RSC1YGR056W PRP16P15938 1071 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W EXO70P19658 623 aa3.33□□□□□ -1.88
RSC1YGR056W ARG1P22768 420 aa3.33□□□□□ -1.88
RSC1YGR056W YCK2P23292 546 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W BUB2P26448 306 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W RPD3P32561 433 aa3.33□□□□□ -1.88
RSC1YGR056W VPS51P36116 164 aa3.33□□□□□ -1.88
RSC1YGR056W RFC3P38629 340 aa3.33□□□□□ -1.88
RSC1YGR056W STB2P46679 850 aa3.33□□□□□ -1.88
RSC1YGR056W SNX4P47057 423 aa3.33□□□□□ -1.88
RSC1YGR056W MDM34P53083 459 aa3.33□□□□□ -1.88
RSC1YGR056W MPS2P53159 387 aa3.33□□□□□ -1.88
RSC1YGR056W SDH1Q00711 640 aa3.33□□□□□ -1.88
RSC1YGR056W AAT1Q01802 451 aa3.33□□□□□ -1.88
RSC1YGR056W LGE1Q02796 332 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W ROT1Q03691 256 aa3.33□□□□□ -1.88
RSC1YGR056W FMP40Q08968 688 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W YPR011CQ12251 326 aa3.33□□□□□ -1.88
RSC1YGR056W RGT2Q12300 763 aa3.33□□□□□ -1.88
RSC1YGR056W MED4Q12343 284 aa3.33□□□□□ -1.88
RSC1YGR056W GPR1Q12361 961 aa3.33□□□□□ -1.88
RSC1YGR056W DOA4P32571 926 aa3.33□□□□□ -1.88
RSC1YGR056W RPS1AP33442 255 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W CUE2P36075 443 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W NTR2P36118 322 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W SOL2P37262 315 aa3.33□□□□□ -1.88
RSC1YGR056W CTP1P38152 299 aa3.33□□□□□ -1.88
RSC1YGR056W TRM7P38238 310 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W YPT35P38815 214 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W ELO1P39540 310 aa3.33□□□□□ -1.88
RSC1YGR056W FRT2P39734 528 aa3.33□□□□□ -1.88
RSC1YGR056W ZRG8P40021 1076 aa3.33□□□□□ -1.88
RSC1YGR056W YER137CP40083 148 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W YIL077CP40508 320 aa3.33□□□□□ -1.88
RSC1YGR056W PHB1P40961 287 aa3.33□□□□□ -1.88
RSC1YGR056W ZIM17P42844 174 aa3.33□□□□□ -1.88
RSC1YGR056W YPT32P51996 222 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W GTR1Q00582 310 aa3.33□□□□□ -1.88
RSC1YGR056W FMN1Q03778 218 aa3.33□□□□□ -1.88
RSC1YGR056W YMR034CQ05131 434 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W PFA4Q12006 378 aa3.33□□□□□ -1.88
RSC1YGR056W RTK1Q12100 620 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W HUA2Q12134 243 aa3.33□□□□□ -1.88
RSC1YGR056W SUL2Q12325 893 aa3.33□□□□□ -1.88
RSC1YGR056W LSO2Q3E772 92 aaKnown RBP3.33□□□□□ -1.88
RSC1YGR056W HSH49Q99181 213 aaPredicted RBP3.33□□□□□ -1.88
RSC1YGR056W CAR1P00812 333 aaKnown RBP3.32□□□□□ -1.88
RSC1YGR056W HIS3P06633 220 aa3.32□□□□□ -1.88
RSC1YGR056W SAM35P14693 329 aa3.32□□□□□ -1.88
RSC1YGR056W DMC1P25453 334 aa3.32□□□□□ -1.88
RSC1YGR056W GBP2P25555 427 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
RSC1YGR056W YPS6P40583 537 aa3.32□□□□□ -1.88
RSC1YGR056W SSU1P41930 458 aa3.32□□□□□ -1.88
RSC1YGR056W GCN20P43535 752 aaKnown RBP3.32□□□□□ -1.88
RSC1YGR056W ECL1P48235 211 aa3.32□□□□□ -1.88
RSC1YGR056W GAS3Q03655 524 aa3.32□□□□□ -1.88
RSC1YGR056W GMC2Q06201 188 aa3.32□□□□□ -1.88
RSC1YGR056W RAD34Q06665 692 aa3.32□□□□□ -1.88
RSC1YGR056W ESA1Q08649 445 aa3.32□□□□□ -1.88
RSC1YGR056W YPL245WQ12179 454 aaKnown RBP3.32□□□□□ -1.88
RSC1YGR056W HAL9Q12180 1030 aa3.32□□□□□ -1.88
RSC1YGR056W YCL012CQ8J0M4 134 aa3.32□□□□□ -1.88
RSC1YGR056W SAS5Q99314 248 aa3.32□□□□□ -1.88
RSC1YGR056W DIF1O13577 133 aa3.32□□□□□ -1.88
RSC1YGR056W AI3P03877 415 aa3.32□□□□□ -1.88
RSC1YGR056W SPT3P06844 337 aa3.32□□□□□ -1.88
RSC1YGR056W RPS4AP0CX35 261 aaKnown RBP3.32□□□□□ -1.88
RSC1YGR056W RPS4BP0CX36 261 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms