RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	TLG2	Q08144	397 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	YLR108C	Q12259	485 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	MDL1	P33310	695 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	YBR139W	P38109	508 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	AVT5	P38176	459 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	OLA1	P38219	394 aa	Known RBP	4.15	□□□□□ -1.75
SCL1	YGL011C	GPI16	P38875	610 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	STN1	P38960	494 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	PCF11	P39081	626 aa	Predicted RBP	4.15	□□□□□ -1.75
SCL1	YGL011C	GDI1	P39958	451 aa	Known RBP	4.15	□□□□□ -1.75
SCL1	YGL011C	JEM1	P40358	645 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	CHS6	P40955	746 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	ERO1	Q03103	563 aa		4.15	□□□□□ -1.75
SCL1	YGL011C	PRP42	Q03776	544 aa	Known RBP	4.15	□□□□□ -1.75
SCL1	YGL011C	RPL1A	P0CX43	217 aa	Known RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	RPL1B	P0CX44	217 aa	Known RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	CBS2	P14905	389 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	RRP7	P25368	297 aa	Predicted RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	CYS4	P32582	507 aa	Known RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	YBR056W	P38081	501 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	PRM5	P40476	318 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	TOF1	P53840	1238 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	YDR341C	Q05506	607 aa	Known RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	PBA1	Q05778	276 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	TSR1	Q07381	788 aa	Known RBP	4.14	□□□□□ -1.75
SCL1	YGL011C	YOR387C	Q08910	206 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	ERV2	Q12284	196 aa		4.14	□□□□□ -1.75
SCL1	YGL011C	YKL097C	P34245	136 aa		4.13	□□□□□ -1.75
SCL1	YGL011C	NDT80	P38830	627 aa		4.13	□□□□□ -1.75
SCL1	YGL011C	SEC28	P40509	296 aa	Known RBP	4.13	□□□□□ -1.75
SCL1	YGL011C	RHO5	P53879	331 aa	Known RBP	4.13	□□□□□ -1.75
SCL1	YGL011C	ELP3	Q02908	557 aa	Known RBP	4.13	□□□□□ -1.75
SCL1	YGL011C	TRP1	P00912	224 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	PDE2	P06776	526 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	ALG1	P16661	449 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	NAM9	P27929	486 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	MUD1	P32605	298 aa	Known RBP	4.12	□□□□□ -1.75
SCL1	YGL011C	YBL059W	P34224	193 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	RXT2	P38255	430 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	INM1	P38710	295 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	SIM1	P40472	476 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	ROG1	P53118	685 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	PIB2	P53191	635 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	STD1	Q02794	444 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	RRN11	Q04712	507 aa		4.12	□□□□□ -1.75
SCL1	YGL011C	RRP9	Q06506	573 aa	Known RBP	4.12	□□□□□ -1.75
SCL1	YGL011C	CDC21	P06785	304 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	DST1	P07273	309 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	SPT15	P13393	240 aa	Known RBP	4.11	□□□□□ -1.75
SCL1	YGL011C	HSP104	P31539	908 aa	Known RBP	4.11	□□□□□ -1.75
SCL1	YGL011C	YER079W	P40052	210 aa	Known RBP	4.11	□□□□□ -1.75
SCL1	YGL011C	SFH5	P47008	294 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	MEH1	Q02205	184 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	MMT1	Q03218	510 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	RCF1	Q03713	159 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	BCH1	Q05029	724 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	MRPL35	Q06678	367 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	RUP1	Q12242	671 aa		4.11	□□□□□ -1.75
SCL1	YGL011C	HHF1	P02309	103 aa	Known RBP	4.1	□□□□□ -1.75
SCL1	YGL011C	HSP82	P02829	709 aa	Known RBP	4.1	□□□□□ -1.75
SCL1	YGL011C	CYC3	P06182	269 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	PHO91	P27514	894 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	DEG1	P31115	442 aa	Known RBP	4.1	□□□□□ -1.75
SCL1	YGL011C	DPH2	P32461	534 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	JLP2	P40206	208 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	YPI1	P43587	155 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	PEX25	Q02969	394 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	TMS1	Q12116	473 aa		4.1	□□□□□ -1.75
SCL1	YGL011C	NFT1	P0CE68	1218 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SCL1	YGL011C	SDH3	P33421	198 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	QDR3	P38227	689 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	PFF1	P38244	976 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	PTH1	P38876	190 aa	Known RBP	4.09	□□□□□ -1.75
SCL1	YGL011C	MLH1	P38920	769 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	SPG5	P42933	373 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	SCW10	Q04951	389 aa		4.09	□□□□□ -1.75
SCL1	YGL011C	RPS8A	P0CX39	200 aa	Known RBP	4.08	□□□□□ -1.76
SCL1	YGL011C	RPS8B	P0CX40	200 aa	Known RBP	4.08	□□□□□ -1.76
SCL1	YGL011C	YCL068C	P25593	260 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	PUP2	P32379	260 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	CHK1	P38147	527 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	BRO1	P48582	844 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	MTM1	P53320	366 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	NDL1	Q06568	189 aa		4.08	□□□□□ -1.76
SCL1	YGL011C	TPT1	Q12272	230 aa	Known RBP	4.08	□□□□□ -1.76
SCL1	YGL011C	OPI3	P05375	206 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	NAT1	P12945	854 aa	Known RBP	4.07	□□□□□ -1.76
SCL1	YGL011C	YSC83	P32792	385 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	SKN1	P33336	771 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SCL1	YGL011C	BLI1	P35727	113 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	ATP3	P38077	311 aa	Known RBP	4.07	□□□□□ -1.76
SCL1	YGL011C	MSG5	P38590	489 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	MMF1	P40185	145 aa	Known RBP	4.07	□□□□□ -1.76
SCL1	YGL011C	REE1	P40893	198 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	YDR541C	Q03049	344 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	HER2	Q03557	464 aa		4.07	□□□□□ -1.76
SCL1	YGL011C	CCE1	Q03702	353 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms