RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W RPA34P47006 233 aaPredicted RBP3.62□□□□□ -1.83
CHD1YER164W HOC1P47124 396 aa3.62□□□□□ -1.83
CHD1YER164W CAF40P53829 373 aa3.62□□□□□ -1.83
CHD1YER164W YPL071CQ02864 156 aa3.62□□□□□ -1.83
CHD1YER164W MET31Q03081 177 aa3.62□□□□□ -1.83
CHD1YER164W TRS31Q03337 283 aa3.62□□□□□ -1.83
CHD1YER164W YHC1Q05900 231 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W YDL199CQ12407 687 aa3.62□□□□□ -1.83
CHD1YER164W AHA1Q12449 350 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W HIS5P07172 385 aa3.62□□□□□ -1.83
CHD1YER164W MOD5P07884 428 aa3.62□□□□□ -1.83
CHD1YER164W MAS1P10507 462 aa3.62□□□□□ -1.83
CHD1YER164W YCR099CP25657 155 aa3.62□□□□□ -1.83
CHD1YER164W TIM23P32897 222 aa3.62□□□□□ -1.83
CHD1YER164W MAC1P35192 417 aa3.62□□□□□ -1.83
CHD1YER164W MRPL3P36516 390 aa3.62□□□□□ -1.83
CHD1YER164W YCR087C-AP37263 153 aa3.62□□□□□ -1.83
CHD1YER164W ECM13P38195 257 aa3.62□□□□□ -1.83
CHD1YER164W NOP16P40007 231 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W AGP3P43548 558 aa3.62□□□□□ -1.83
CHD1YER164W MCM22P47167 239 aa3.62□□□□□ -1.83
CHD1YER164W YPR003CP53394 754 aa3.62□□□□□ -1.83
CHD1YER164W BSC5P53755 489 aa3.62□□□□□ -1.83
CHD1YER164W CDC14Q00684 551 aa3.62□□□□□ -1.83
CHD1YER164W RMI1Q02685 241 aa3.62□□□□□ -1.83
CHD1YER164W KAP120Q02932 1032 aa3.62□□□□□ -1.83
CHD1YER164W YPR091CQ06833 770 aa3.62□□□□□ -1.83
CHD1YER164W LEA1Q08963 238 aaPredicted RBP3.62□□□□□ -1.83
CHD1YER164W YPL245WQ12179 454 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W LDB19Q12502 818 aa3.62□□□□□ -1.83
CHD1YER164W CDC4P07834 779 aa3.62□□□□□ -1.83
CHD1YER164W YPK1P12688 680 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W ACO1P19414 778 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CHD1YER164W HOP1P20050 605 aa3.62□□□□□ -1.83
CHD1YER164W KGD1P20967 1014 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W TRX2P22803 104 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W ATG15P25641 520 aa3.62□□□□□ -1.83
CHD1YER164W HOM6P31116 359 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W ISC10P32645 267 aa3.62□□□□□ -1.83
CHD1YER164W IST2P38250 946 aa3.62□□□□□ -1.83
CHD1YER164W OCA5P38738 679 aa3.62□□□□□ -1.83
CHD1YER164W YAP1801P38856 637 aa3.62□□□□□ -1.83
CHD1YER164W PTI1P39927 425 aaPredicted RBP3.62□□□□□ -1.83
CHD1YER164W AMA1P50082 593 aa3.62□□□□□ -1.83
CHD1YER164W BOL2P53082 120 aa3.62□□□□□ -1.83
CHD1YER164W TPN1P53099 579 aa3.62□□□□□ -1.83
CHD1YER164W PEX31P53203 462 aa3.62□□□□□ -1.83
CHD1YER164W YTP1P53584 459 aa3.62□□□□□ -1.83
CHD1YER164W SIW14P53965 281 aa3.62□□□□□ -1.83
CHD1YER164W NUP116Q02630 1113 aa3.62□□□□□ -1.83
CHD1YER164W UTP21Q06078 939 aaPredicted RBP3.62□□□□□ -1.83
CHD1YER164W ASR1Q06834 288 aa3.62□□□□□ -1.83
CHD1YER164W YCT1Q12235 531 aa3.62□□□□□ -1.83
CHD1YER164W PDA1P16387 420 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W YBR241CP38142 488 aa3.62□□□□□ -1.83
CHD1YER164W PGD1P40356 397 aa3.62□□□□□ -1.83
CHD1YER164W YIL077CP40508 320 aa3.62□□□□□ -1.83
CHD1YER164W YFR018CP43599 363 aa3.62□□□□□ -1.83
CHD1YER164W IRC18P47056 224 aa3.62□□□□□ -1.83
CHD1YER164W YJR154WP47181 346 aa3.62□□□□□ -1.83
CHD1YER164W FOL2P51601 243 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W SOK2P53438 785 aaPredicted RBP3.62□□□□□ -1.83
CHD1YER164W HOF1Q05080 669 aa3.62□□□□□ -1.83
CHD1YER164W DCR2Q05924 578 aa3.62□□□□□ -1.83
CHD1YER164W EMG1Q06287 252 aaKnown RBP3.62□□□□□ -1.83
CHD1YER164W PMT7Q06644 662 aa3.62□□□□□ -1.83
CHD1YER164W YOR114WQ12219 294 aa3.62□□□□□ -1.83
CHD1YER164W UBR2Q07963 1872 aa3.61□□□□□ -1.83
CHD1YER164W FLP1P03870 423 aa3.61□□□□□ -1.83
CHD1YER164W ARF2P19146 181 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W MRPL33P20084 86 aa3.61□□□□□ -1.83
CHD1YER164W WBP1P33767 430 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W IPT1P38954 527 aa3.61□□□□□ -1.83
CHD1YER164W YJR030CP47101 745 aa3.61□□□□□ -1.83
CHD1YER164W ECL1P48235 211 aa3.61□□□□□ -1.83
CHD1YER164W VOA1P53262 265 aa3.61□□□□□ -1.83
CHD1YER164W PIR3Q03180 325 aa3.61□□□□□ -1.83
CHD1YER164W ECM22Q05958 814 aaPredicted RBP3.61□□□□□ -1.83
CHD1YER164W TRM8Q12009 286 aa3.61□□□□□ -1.83
CHD1YER164W LCB4Q12246 624 aa3.61□□□□□ -1.83
CHD1YER164W DCN1Q12395 269 aa3.61□□□□□ -1.83
CHD1YER164W LPX1Q12405 387 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W SEC53P07283 254 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W PET9P18239 318 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W MRPL9P31334 269 aa3.61□□□□□ -1.83
CHD1YER164W POL12P38121 705 aaPredicted RBP3.61□□□□□ -1.83
CHD1YER164W GPX2P38143 162 aa3.61□□□□□ -1.83
CHD1YER164W ZTA1P38230 334 aaKnown RBP3.61□□□□□ -1.83
CHD1YER164W NSG1P38837 291 aa3.61□□□□□ -1.83
CHD1YER164W PRM9P39551 298 aa3.61□□□□□ -1.83
CHD1YER164W MND2P40577 368 aa3.61□□□□□ -1.83
CHD1YER164W CAF16P43569 289 aa3.61□□□□□ -1.83
CHD1YER164W SSY5P47002 699 aa3.61□□□□□ -1.83
CHD1YER164W COG1P53079 417 aa3.61□□□□□ -1.83
CHD1YER164W MNT4P53745 580 aa3.61□□□□□ -1.83
CHD1YER164W IBD2P53892 351 aa3.61□□□□□ -1.83
CHD1YER164W MRP51Q02950 344 aa3.61□□□□□ -1.83
CHD1YER164W MRPS17Q03246 237 aaPredicted RBP3.61□□□□□ -1.83
CHD1YER164W YOL036WQ08206 761 aa3.61□□□□□ -1.83
CHD1YER164W THP1Q08231 455 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 147.8 ms