RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C MSS51P32335 436 aa6.2□□□□□ -1.42
SHO1YER118C ACP1P32463 125 aa6.2□□□□□ -1.42
SHO1YER118C REC114P32841 428 aa6.2□□□□□ -1.42
SHO1YER118C PPS1P38148 807 aa6.2□□□□□ -1.42
SHO1YER118C PRY1P47032 299 aa6.2□□□□□ -1.42
SHO1YER118C YJR011CP47086 261 aaPredicted RBP6.2□□□□□ -1.42
SHO1YER118C RET3P53600 189 aa6.2□□□□□ -1.42
SHO1YER118C BET4Q00618 327 aa6.2□□□□□ -1.42
SHO1YER118C YMR087WQ04299 284 aa6.2□□□□□ -1.42
SHO1YER118C MYO5Q04439 1219 aaKnown RBP6.2□□□□□ -1.42
SHO1YER118C ACK1Q07622 623 aaPredicted RBP6.2□□□□□ -1.42
SHO1YER118C LOT6Q07923 191 aa6.2□□□□□ -1.42
SHO1YER118C RAX1Q08760 435 aa6.2□□□□□ -1.42
SHO1YER118C PRP46Q12417 451 aaPredicted RBP6.2□□□□□ -1.42
SHO1YER118C BRR1Q99177 341 aaPredicted RBP6.2□□□□□ -1.42
SHO1YER118C UBA3Q99344 299 aa6.2□□□□□ -1.42
SHO1YER118C SSK22P25390 1331 aaPredicted RBP6.2□□□□□ -1.42
SHO1YER118C COX2P00410 251 aa6.19□□□□□ -1.42
SHO1YER118C CHS1P08004 1131 aa6.19□□□□□ -1.42
SHO1YER118C CHO1P08456 276 aa6.19□□□□□ -1.42
SHO1YER118C COQ1P18900 473 aa6.19□□□□□ -1.42
SHO1YER118C APA2P22108 325 aa6.19□□□□□ -1.42
SHO1YER118C PRR1P28708 518 aa6.19□□□□□ -1.42
SHO1YER118C TCM62P38228 572 aaKnown RBP6.19□□□□□ -1.42
SHO1YER118C CCT2P39076 527 aaKnown RBP6.19□□□□□ -1.42
SHO1YER118C FMP52P40008 231 aa6.19□□□□□ -1.42
SHO1YER118C UTP25P40498 721 aaKnown RBP6.19□□□□□ -1.42
SHO1YER118C SAS2P40963 338 aa6.19□□□□□ -1.42
SHO1YER118C SCD6P45978 349 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
SHO1YER118C RMR1P53060 241 aa6.19□□□□□ -1.42
SHO1YER118C KAP114P53067 1004 aa6.19□□□□□ -1.42
SHO1YER118C ZPR1P53303 486 aaKnown RBP6.19□□□□□ -1.42
SHO1YER118C SNO2P53823 222 aa6.19□□□□□ -1.42
SHO1YER118C AAT1Q01802 451 aa6.19□□□□□ -1.42
SHO1YER118C YLR224WQ05947 369 aa6.19□□□□□ -1.42
SHO1YER118C ARO10Q06408 635 aa6.19□□□□□ -1.42
SHO1YER118C ENB1Q08299 606 aa6.19□□□□□ -1.42
SHO1YER118C RNH203Q12338 110 aa6.19□□□□□ -1.42
SHO1YER118C LAS17Q12446 633 aa6.19□□□□□ -1.42
SHO1YER118C TRP4P07285 380 aaPredicted RBP6.18□□□□□ -1.42
SHO1YER118C MATALPHA1P0CY06 175 aa6.18□□□□□ -1.42
SHO1YER118C HMLALPHA1P0CY07 175 aa6.18□□□□□ -1.42
SHO1YER118C NHP6BP11633 99 aaKnown RBP6.18□□□□□ -1.42
SHO1YER118C RNR3P21672 869 aaKnown RBP6.18□□□□□ -1.42
SHO1YER118C DBR1P24309 405 aaKnown RBP6.18□□□□□ -1.42
SHO1YER118C PBN1P25580 416 aa6.18□□□□□ -1.42
SHO1YER118C CSM1P25651 190 aa6.18□□□□□ -1.42
SHO1YER118C ACH1P32316 526 aa6.18□□□□□ -1.42
SHO1YER118C ATP11P32453 318 aa6.18□□□□□ -1.42
SHO1YER118C CYS4P32582 507 aaKnown RBP6.18□□□□□ -1.42
SHO1YER118C KDX1P36005 433 aa6.18□□□□□ -1.42
SHO1YER118C BNA4P38169 460 aa6.18□□□□□ -1.42
SHO1YER118C HXT9P40885 567 aa6.18□□□□□ -1.42
SHO1YER118C YFL066CP43538 392 aa6.18□□□□□ -1.42
SHO1YER118C SNG1P46950 547 aa6.18□□□□□ -1.42
SHO1YER118C HXT11P54862 567 aa6.18□□□□□ -1.42
SHO1YER118C PAM18Q07914 168 aa6.18□□□□□ -1.42
SHO1YER118C YDL176WQ12027 708 aa6.18□□□□□ -1.42
SHO1YER118C YOR029WQ12243 111 aa6.18□□□□□ -1.42
SHO1YER118C YDL177CQ12257 170 aa6.18□□□□□ -1.42
SHO1YER118C YPR1Q12458 312 aa6.18□□□□□ -1.42
SHO1YER118C YPT1P01123 206 aaKnown RBP6.17□□□□□ -1.42
SHO1YER118C MET16P18408 261 aaPredicted RBP6.17□□□□□ -1.42
SHO1YER118C COQ2P32378 372 aa6.17□□□□□ -1.42
SHO1YER118C COS9P36034 407 aa6.17□□□□□ -1.42
SHO1YER118C HIT1P46973 164 aa6.17□□□□□ -1.42
SHO1YER118C YJL163CP46996 555 aa6.17□□□□□ -1.42
SHO1YER118C RIM8P53179 542 aa6.17□□□□□ -1.42
SHO1YER118C NOP13P53883 403 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SHO1YER118C GCN5Q03330 439 aa6.17□□□□□ -1.42
SHO1YER118C NUP53Q03790 475 aa6.17□□□□□ -1.42
SHO1YER118C FUS2Q05670 677 aa6.17□□□□□ -1.42
SHO1YER118C HRD3Q05787 833 aa6.17□□□□□ -1.42
SHO1YER118C COQ11Q05892 277 aa6.17□□□□□ -1.42
SHO1YER118C YOR365CQ08844 703 aa6.17□□□□□ -1.42
SHO1YER118C FRE7Q12333 620 aa6.17□□□□□ -1.42
SHO1YER118C FSH3Q99369 266 aa6.17□□□□□ -1.42
SHO1YER118C FRS2P15625 503 aaKnown RBP6.16□□□□□ -1.42
SHO1YER118C RPS5P26783 225 aaKnown RBP6.16□□□□□ -1.42
SHO1YER118C MSN2P33748 704 aa6.16□□□□□ -1.42
SHO1YER118C MRPL10P36520 322 aa6.16□□□□□ -1.42
SHO1YER118C MMS21P38632 267 aa6.16□□□□□ -1.42
SHO1YER118C UBA4P38820 440 aa6.16□□□□□ -1.42
SHO1YER118C YMR134WP40207 237 aa6.16□□□□□ -1.42
SHO1YER118C RFC4P40339 323 aaKnown RBP6.16□□□□□ -1.42
SHO1YER118C GLG2P47011 380 aa6.16□□□□□ -1.42
SHO1YER118C CUS2P53830 285 aaPredicted RBP6.16□□□□□ -1.42
SHO1YER118C RTC4P53850 401 aa6.16□□□□□ -1.42
SHO1YER118C PFA5Q03289 374 aa6.16□□□□□ -1.42
SHO1YER118C IZH1Q03419 316 aa6.16□□□□□ -1.42
SHO1YER118C HSP31Q04432 237 aa6.16□□□□□ -1.42
SHO1YER118C AIM33Q04516 312 aa6.16□□□□□ -1.42
SHO1YER118C PIG1Q06216 648 aa6.16□□□□□ -1.42
SHO1YER118C GRS2Q06817 618 aa6.16□□□□□ -1.42
SHO1YER118C YPR022CQ12139 1133 aa6.16□□□□□ -1.42
SHO1YER118C YLR122CQ12312 125 aa6.16□□□□□ -1.42
SHO1YER118C RGS2Q99188 309 aa6.16□□□□□ -1.42
SHO1YER118C RPL12AP0CX53 165 aaKnown RBP6.15□□□□□ -1.42
SHO1YER118C RPL12BP0CX54 165 aa6.15□□□□□ -1.42
SHO1YER118C MRP2P10663 115 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms