RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C HEL1P36113 551 aa2.92□□□□□ -1.94
VAB2YEL005C ASC1P38011 319 aaKnown RBP2.92□□□□□ -1.94
VAB2YEL005C YAL037WP39728 267 aa2.92□□□□□ -1.94
VAB2YEL005C YER079WP40052 210 aaKnown RBP2.92□□□□□ -1.94
VAB2YEL005C AZR1P50080 613 aa2.92□□□□□ -1.94
VAB2YEL005C MMT1Q03218 510 aa2.92□□□□□ -1.94
VAB2YEL005C RUP1Q12242 671 aa2.92□□□□□ -1.94
VAB2YEL005C ATG34Q12292 412 aa2.92□□□□□ -1.94
VAB2YEL005C DST1P07273 309 aa2.91□□□□□ -1.94
VAB2YEL005C MDL1P33310 695 aa2.91□□□□□ -1.94
VAB2YEL005C SER3P40054 469 aa2.91□□□□□ -1.94
VAB2YEL005C GAT2P40209 560 aa2.91□□□□□ -1.94
VAB2YEL005C JEM1P40358 645 aa2.91□□□□□ -1.94
VAB2YEL005C PRM5P40476 318 aa2.91□□□□□ -1.94
VAB2YEL005C BOR1P53838 576 aa2.91□□□□□ -1.94
VAB2YEL005C TOF1P53840 1238 aa2.91□□□□□ -1.94
VAB2YEL005C HER2Q03557 464 aa2.91□□□□□ -1.94
VAB2YEL005C YOR387CQ08910 206 aa2.91□□□□□ -1.94
VAB2YEL005C CEX1Q12453 761 aa2.91□□□□□ -1.94
VAB2YEL005C RMD5Q12508 421 aa2.91□□□□□ -1.94
VAB2YEL005C PAR32Q12515 295 aaKnown RBP2.91□□□□□ -1.94
VAB2YEL005C YER078W-AQ3E7A2 54 aa2.91□□□□□ -1.94
VAB2YEL005C ILV5P06168 395 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C GEX1P25596 615 aa2.9□□□□□ -1.95
VAB2YEL005C PHO91P27514 894 aa2.9□□□□□ -1.95
VAB2YEL005C ARO2P28777 376 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C COX13P32799 129 aa2.9□□□□□ -1.95
VAB2YEL005C LRP1P38801 184 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C MMF1P40185 145 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C TOM22P49334 152 aa2.9□□□□□ -1.95
VAB2YEL005C RHO5P53879 331 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C STD1Q02794 444 aa2.9□□□□□ -1.95
VAB2YEL005C ELP3Q02908 557 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C RCF1Q03713 159 aa2.9□□□□□ -1.95
VAB2YEL005C PRP42Q03776 544 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C RPN9Q04062 393 aaKnown RBP2.9□□□□□ -1.95
VAB2YEL005C SUP35P05453 685 aaKnown RBP2.89□□□□□ -1.95
VAB2YEL005C IMA3P0CW40 589 aa2.89□□□□□ -1.95
VAB2YEL005C IMA4P0CW41 589 aa2.89□□□□□ -1.95
VAB2YEL005C NAM2P11325 894 aa2.89□□□□□ -1.95
VAB2YEL005C DAL2P25335 343 aa2.89□□□□□ -1.95
VAB2YEL005C SLM5P25345 492 aaKnown RBP2.89□□□□□ -1.95
VAB2YEL005C ITR1P30605 584 aa2.89□□□□□ -1.95
VAB2YEL005C MNS1P32906 549 aa2.89□□□□□ -1.95
VAB2YEL005C AVT5P38176 459 aa2.89□□□□□ -1.95
VAB2YEL005C COX14P39103 70 aa2.89□□□□□ -1.95
VAB2YEL005C YPI1P43587 155 aa2.89□□□□□ -1.95
VAB2YEL005C SFH5P47008 294 aa2.89□□□□□ -1.95
VAB2YEL005C BCH1Q05029 724 aa2.89□□□□□ -1.95
VAB2YEL005C YLR456WQ06199 204 aa2.89□□□□□ -1.95
VAB2YEL005C RRP9Q06506 573 aaKnown RBP2.89□□□□□ -1.95
VAB2YEL005C IMA2Q08295 589 aa2.89□□□□□ -1.95
VAB2YEL005C RSA1Q08932 381 aa2.89□□□□□ -1.95
VAB2YEL005C SRL2Q12020 392 aa2.89□□□□□ -1.95
VAB2YEL005C RPN5Q12250 445 aaKnown RBP2.89□□□□□ -1.95
VAB2YEL005C TPT1Q12272 230 aaKnown RBP2.89□□□□□ -1.95
VAB2YEL005C TRP1P00912 224 aa2.88□□□□□ -1.95
VAB2YEL005C PET123P17558 318 aa2.88□□□□□ -1.95
VAB2YEL005C YCL068CP25593 260 aa2.88□□□□□ -1.95
VAB2YEL005C BLI1P35727 113 aa2.88□□□□□ -1.95
VAB2YEL005C INM1P38710 295 aa2.88□□□□□ -1.95
VAB2YEL005C SEC28P40509 296 aaKnown RBP2.88□□□□□ -1.95
VAB2YEL005C YIL029CP40538 142 aa2.88□□□□□ -1.95
VAB2YEL005C ROG1P53118 685 aa2.88□□□□□ -1.95
VAB2YEL005C RRP46P53256 223 aaPredicted RBP2.88□□□□□ -1.95
VAB2YEL005C CWC25P53854 179 aaKnown RBP2.88□□□□□ -1.95
VAB2YEL005C HXT11P54862 567 aa2.88□□□□□ -1.95
VAB2YEL005C URH1Q04179 340 aa2.88□□□□□ -1.95
VAB2YEL005C UAF30Q08747 228 aa2.88□□□□□ -1.95
VAB2YEL005C YRM1Q12340 786 aa2.88□□□□□ -1.95
VAB2YEL005C RPL6BP05739 176 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C ATP1P07251 545 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C ARO3P14843 370 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C ALG1P16661 449 aa2.87□□□□□ -1.95
VAB2YEL005C NAM9P27929 486 aa2.87□□□□□ -1.95
VAB2YEL005C YBR139WP38109 508 aa2.87□□□□□ -1.95
VAB2YEL005C CHK1P38147 527 aa2.87□□□□□ -1.95
VAB2YEL005C KAP104P38217 918 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C WSS1P38838 269 aa2.87□□□□□ -1.95
VAB2YEL005C STN1P38960 494 aa2.87□□□□□ -1.95
VAB2YEL005C EFM4P40516 257 aa2.87□□□□□ -1.95
VAB2YEL005C YGR210CP42942 411 aa2.87□□□□□ -1.95
VAB2YEL005C BTN2P53286 410 aa2.87□□□□□ -1.95
VAB2YEL005C MTQ1P53944 314 aa2.87□□□□□ -1.95
VAB2YEL005C RPL6AQ02326 176 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C PEX25Q02969 394 aa2.87□□□□□ -1.95
VAB2YEL005C YDR541CQ03049 344 aa2.87□□□□□ -1.95
VAB2YEL005C CCE1Q03702 353 aa2.87□□□□□ -1.95
VAB2YEL005C PAL1Q05518 499 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C HRI1Q05905 244 aaKnown RBP2.87□□□□□ -1.95
VAB2YEL005C NCA2Q12374 616 aa2.87□□□□□ -1.95
VAB2YEL005C COX3P00420 269 aa2.86□□□□□ -1.95
VAB2YEL005C POP5P28005 173 aa2.86□□□□□ -1.95
VAB2YEL005C NRP1P32770 719 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
VAB2YEL005C YPS6P40583 537 aa2.86□□□□□ -1.95
VAB2YEL005C PAC11P40960 533 aa2.86□□□□□ -1.95
VAB2YEL005C NUP116Q02630 1113 aa2.86□□□□□ -1.95
VAB2YEL005C YDR341CQ05506 607 aaKnown RBP2.86□□□□□ -1.95
VAB2YEL005C NSE1Q07913 336 aa2.86□□□□□ -1.95
VAB2YEL005C ERV2Q12284 196 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms