RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C YPT1P01123 206 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C RPP1AP05318 106 aaPredicted RBP2.52□□□□□ -2.01
SSN2YDR443C RPS3P05750 240 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C PET494P07390 489 aaPredicted RBP2.52□□□□□ -2.01
SSN2YDR443C RPL27AP0C2H6 136 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C RPL27BP0C2H7 136 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C NFT1P0CE68 1218 aa2.52□□□□□ -2.01
SSN2YDR443C ELO2P25358 347 aa2.52□□□□□ -2.01
SSN2YDR443C LRE1P25579 583 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C YCR015CP25616 317 aa2.52□□□□□ -2.01
SSN2YDR443C CDC20P26309 610 aa2.52□□□□□ -2.01
SSN2YDR443C PDB1P32473 366 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C GCG1P32656 232 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C SKG6P32900 734 aaPredicted RBP2.52□□□□□ -2.01
SSN2YDR443C GMH1P36125 273 aa2.52□□□□□ -2.01
SSN2YDR443C RFC5P38251 354 aa2.52□□□□□ -2.01
SSN2YDR443C ICS2P38284 255 aa2.52□□□□□ -2.01
SSN2YDR443C SEC72P39742 193 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C ORC3P54790 616 aa2.52□□□□□ -2.01
SSN2YDR443C MRP51Q02950 344 aa2.52□□□□□ -2.01
SSN2YDR443C ABP140Q08641 628 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SSN2YDR443C RIO1Q12196 484 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C YOS9Q99220 542 aa2.52□□□□□ -2.01
SSN2YDR443C HRP1Q99383 534 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C ATP1P07251 545 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C YLL053CP0CD98 152 aa2.51□□□□□ -2.01
SSN2YDR443C MAS1P10507 462 aa2.51□□□□□ -2.01
SSN2YDR443C CDC23P16522 626 aa2.51□□□□□ -2.01
SSN2YDR443C GAR1P28007 205 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C PSO2P30620 661 aa2.51□□□□□ -2.01
SSN2YDR443C YSC83P32792 385 aa2.51□□□□□ -2.01
SSN2YDR443C RPC34P32910 317 aa2.51□□□□□ -2.01
SSN2YDR443C RPC25P35718 212 aa2.51□□□□□ -2.01
SSN2YDR443C RIX1P38883 763 aaPredicted RBP2.51□□□□□ -2.01
SSN2YDR443C GID8P40208 455 aa2.51□□□□□ -2.01
SSN2YDR443C YMR147WP40218 223 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C EFM6P53970 246 aa2.51□□□□□ -2.01
SSN2YDR443C SPP2Q02521 185 aa2.51□□□□□ -2.01
SSN2YDR443C PLB2Q03674 706 aa2.51□□□□□ -2.01
SSN2YDR443C TCP1P12612 559 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C ABF1P14164 731 aa2.51□□□□□ -2.01
SSN2YDR443C AST1P35183 429 aa2.51□□□□□ -2.01
SSN2YDR443C RIB1P38066 345 aa2.51□□□□□ -2.01
SSN2YDR443C YJL206CP39529 758 aa2.51□□□□□ -2.01
SSN2YDR443C FKH1P40466 484 aa2.51□□□□□ -2.01
SSN2YDR443C YJL163CP46996 555 aa2.51□□□□□ -2.01
SSN2YDR443C FMP33P46998 180 aa2.51□□□□□ -2.01
SSN2YDR443C KAP114P53067 1004 aa2.51□□□□□ -2.01
SSN2YDR443C DIA1P54005 336 aa2.51□□□□□ -2.01
SSN2YDR443C MSC2Q03455 724 aa2.51□□□□□ -2.01
SSN2YDR443C YMR160WQ03823 816 aa2.51□□□□□ -2.01
SSN2YDR443C SPC2Q04969 178 aa2.51□□□□□ -2.01
SSN2YDR443C DCR2Q05924 578 aa2.51□□□□□ -2.01
SSN2YDR443C IPK1Q06667 281 aa2.51□□□□□ -2.01
SSN2YDR443C PAM18Q07914 168 aa2.51□□□□□ -2.01
SSN2YDR443C YOR365CQ08844 703 aa2.51□□□□□ -2.01
SSN2YDR443C PRP46Q12417 451 aaPredicted RBP2.51□□□□□ -2.01
SSN2YDR443C RRI1Q12468 440 aa2.51□□□□□ -2.01
SSN2YDR443C UBA3Q99344 299 aa2.51□□□□□ -2.01
SSN2YDR443C SEC3P33332 1336 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C THR4P16120 514 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C PRP18P33411 251 aaPredicted RBP2.51□□□□□ -2.01
SSN2YDR443C RRP4P38792 359 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C RTT107P38850 1070 aa2.51□□□□□ -2.01
SSN2YDR443C FMO1P38866 432 aa2.51□□□□□ -2.01
SSN2YDR443C CTF8P38877 133 aa2.51□□□□□ -2.01
SSN2YDR443C AGE2P40529 298 aa2.51□□□□□ -2.01
SSN2YDR443C BNA3P47039 444 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C RFX1P48743 811 aa2.51□□□□□ -2.01
SSN2YDR443C ZPR1P53303 486 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C YDR541CQ03049 344 aa2.51□□□□□ -2.01
SSN2YDR443C YMR187CQ03236 431 aa2.51□□□□□ -2.01
SSN2YDR443C DIA2Q08496 732 aaPredicted RBP2.51□□□□□ -2.01
SSN2YDR443C RAX1Q08760 435 aa2.51□□□□□ -2.01
SSN2YDR443C COX3P00420 269 aa2.51□□□□□ -2.01
SSN2YDR443C GDH1P07262 454 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C FBA1P14540 359 aaKnown RBP2.51□□□□□ -2.01
SSN2YDR443C GAC1P28006 793 aa2.51□□□□□ -2.01
SSN2YDR443C YFR020WP43600 232 aa2.51□□□□□ -2.01
SSN2YDR443C MSE1P48525 536 aa2.51□□□□□ -2.01
SSN2YDR443C MTL1P53214 551 aa2.51□□□□□ -2.01
SSN2YDR443C YDR109CQ04585 715 aa2.51□□□□□ -2.01
SSN2YDR443C IVY1Q04934 453 aa2.51□□□□□ -2.01
SSN2YDR443C YFT2Q06676 274 aa2.51□□□□□ -2.01
SSN2YDR443C REX4Q08237 289 aa2.51□□□□□ -2.01
SSN2YDR443C DNL4Q08387 944 aaPredicted RBP2.51□□□□□ -2.01
SSN2YDR443C YER175W-AQ8TGU4 54 aa2.51□□□□□ -2.01
SSN2YDR443C RAD7P06779 565 aa2.5□□□□□ -2.01
SSN2YDR443C FEN2P25621 512 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C SNU114P36048 1008 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C QDR3P38227 689 aa2.5□□□□□ -2.01
SSN2YDR443C VHC1P38329 1120 aa2.5□□□□□ -2.01
SSN2YDR443C SPC97P38863 823 aa2.5□□□□□ -2.01
SSN2YDR443C PFS1P38872 237 aa2.5□□□□□ -2.01
SSN2YDR443C ASI2P53895 289 aa2.5□□□□□ -2.01
SSN2YDR443C SSY1Q03770 852 aa2.5□□□□□ -2.01
SSN2YDR443C HMO1Q03973 246 aaKnown RBP2.5□□□□□ -2.01
SSN2YDR443C ARR3Q06598 404 aa2.5□□□□□ -2.01
SSN2YDR443C MCM21Q06675 368 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms