RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	SRB6	P32570	121 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	PDC2	P32896	925 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	SHP1	P34223	423 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	SSS1	P35179	80 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	SOL2	P37262	315 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	TCM62	P38228	572 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	EXO5	P38289	585 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	YBR259W	P38338	688 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	RRP3	P38712	501 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	YEN1	P40028	759 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	ZIM17	P42844	174 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	MRPL22	P53881	309 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	NAM8	Q00539	523 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	PRM15	Q03262	622 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	OYE2	Q03558	400 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	ISR1	Q06098	443 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	YLR345W	Q06137	509 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	PHO92	Q06390	306 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	BDS1	Q08347	646 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	NSL1	Q12143	216 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	LCB4	Q12246	624 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	FYV7	Q12247	151 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	MPD2	Q99316	277 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	TCP1	P12612	559 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	EST1	P17214	699 aa	Predicted RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	RNA14	P25298	677 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	DAL2	P25335	343 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	RRP7	P25368	297 aa	Predicted RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	PPZ1	P26570	692 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	ERG9	P29704	444 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	FAA1	P30624	700 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	DEG1	P31115	442 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	DBF4	P32325	704 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	TSA1	P34760	196 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	AIM29	P36154	155 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	HMT1	P38074	348 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	FMP23	P38231	175 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	LAS21	P40367	830 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	CFD1	P40558	293 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	RGD2	P43556	714 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	ASG7	P46993	209 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	MOG1	P47123	218 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	VOA1	P53262	265 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	UBP16	Q02863	499 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	NHX1	Q04121	633 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	YHC1	Q05900	231 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	YOL159C	Q08300	171 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	RKM5	Q12367	367 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	YOR019W	Q99248	730 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	TRP4	P07285	380 aa	Predicted RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
DBF4	YDR052C	CAF20	P12962	161 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	AAT2	P23542	418 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	TRK2	P28584	889 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	MRP4	P32902	394 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	FLO10	P36170	1169 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	MRPL15	P36523	253 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	AIM3	P38266	947 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	SHG1	P38337	142 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	PHO89	P38361	574 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	IKI1	P38874	309 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	UIP3	P39547	235 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	PCL6	P40038	420 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	MMF1	P40185	145 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	AAD14	P42884	376 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	SLS1	P42900	643 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	SIP4	P46954	829 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	MRX5	P47007	382 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YGL138C	P53122	345 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YGR012W	P53206	393 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YNR065C	P53751	1116 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	IDP3	P53982	420 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	ECM9	Q02202	377 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	MRPS16	Q02608	121 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	HSP31	Q04432	237 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	DCR2	Q05924	578 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	NEJ1	Q06148	342 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	SYT1	Q06836	1226 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	ENT4	Q07872	247 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	NMD4	Q12129	218 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YGK3	Q12222	375 aa	Predicted RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	FLP1	P03870	423 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	CTT1	P06115	562 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	SSA3	P09435	649 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	DBR1	P24309	405 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	SAT4	P25333	603 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	YKR051W	P36142	418 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YBR241C	P38142	488 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YHR054C	P38780	354 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	RSC30	P38781	883 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	PPE1	P38796	400 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	PAC1	P39946	494 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	SCC4	P40090	624 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	YIL024C	P40543	189 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	CIT3	P43635	486 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	HXT16	P47185	567 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	HLJ1	P48353	224 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	HXT11	P54862	567 aa		5.02	□□□□□ -1.61
DBF4	YDR052C	RLI1	Q03195	608 aa	Known RBP	5.02	□□□□□ -1.61
DBF4	YDR052C	YMR209C	Q03648	457 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms