RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SLM5	P25345	492 aa	Known RBP	5.07	□□□□□ -1.6
RPN5	YDL147W	RDS1	P25611	832 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	RTT107	P38850	1070 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	PRM1	P53835	661 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	STD1	Q02794	444 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	MRP51	Q02950	344 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	MGR3	Q04472	501 aa		5.07	□□□□□ -1.6
RPN5	YDL147W	SCH9	P11792	824 aa	Known RBP	5.06	□□□□□ -1.6
RPN5	YDL147W	PRP16	P15938	1071 aa	Predicted RBP	5.06	□□□□□ -1.6
RPN5	YDL147W	YCR022C	P25620	114 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	ATP3	P38077	311 aa	Known RBP	5.06	□□□□□ -1.6
RPN5	YDL147W	MMF1	P40185	145 aa	Known RBP	5.06	□□□□□ -1.6
RPN5	YDL147W	LAM5	P43560	674 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	RTT101	P47050	842 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	RTT102	P53330	157 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	PIR3	Q03180	325 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	RRP9	Q06506	573 aa	Known RBP	5.06	□□□□□ -1.6
RPN5	YDL147W	RGT2	Q12300	763 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	RMD5	Q12508	421 aa		5.06	□□□□□ -1.6
RPN5	YDL147W	IMA3	P0CW40	589 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	IMA4	P0CW41	589 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	SPO12	P17123	173 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	RGT1	P32862	1170 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	SHE4	P51534	789 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	HST1	P53685	503 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	MPS1	P54199	764 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	RRB1	Q04225	511 aa	Known RBP	5.05	□□□□□ -1.6
RPN5	YDL147W	SNT309	Q06091	175 aa	Predicted RBP	5.05	□□□□□ -1.6
RPN5	YDL147W	IMA2	Q08295	589 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	AAD15	Q08361	143 aa		5.05	□□□□□ -1.6
RPN5	YDL147W	RPL20A	P0CX23	172 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	RPL20B	P0CX24	172 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	SAM1	P10659	382 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	ATR1	P13090	542 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	SAM2	P19358	384 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	SKN1	P33336	771 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	PMU1	P36069	295 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	SPP381	P38282	291 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	MTC4	P38335	694 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	YND1	P40009	630 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	GCD10	P41814	478 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	EFM3	P47163	339 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	CAF40	P53829	373 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	UTP6	Q02354	440 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	NUP53	Q03790	475 aa		5.04	□□□□□ -1.6
RPN5	YDL147W	RTC5	Q12108	567 aa	Known RBP	5.04	□□□□□ -1.6
RPN5	YDL147W	STE3	P06783	470 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	COX13	P32799	129 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	SRB2	P34162	210 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	DOA1	P36037	715 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	STP2	P38704	541 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	MST28	P39552	234 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	MPS2	P53159	387 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	ARK1	P53974	638 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	URC2	Q04411	772 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	SMA2	Q04658	369 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	ECM7	Q06200	448 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	PEX27	Q08580	376 aa		5.03	□□□□□ -1.6
RPN5	YDL147W	ARF1	P11076	181 aa	Known RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	CDC23	P16522	626 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	SPT10	P35208	640 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	KKQ8	P36004	724 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	YPT53	P36019	220 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	MSG5	P38590	489 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	PES4	P39684	611 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	ATM1	P40416	690 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	MKT1	P40850	830 aa	Known RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	GPI8	P49018	411 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	PRP3	Q03338	469 aa	Predicted RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	ERP1	Q05359	219 aa	Known RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	HCR1	Q05775	265 aa	Known RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	NOP6	Q07623	225 aa	Known RBP	5.02	□□□□□ -1.61
RPN5	YDL147W	YAP7	Q08182	245 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	SRL2	Q12020	392 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	RNH203	Q12338	110 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	CEX1	Q12453	761 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	SET6	Q12529	373 aa		5.02	□□□□□ -1.61
RPN5	YDL147W	OPI3	P05375	206 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	ATP1	P07251	545 aa	Known RBP	5.01	□□□□□ -1.61
RPN5	YDL147W	RPL12A	P0CX53	165 aa	Known RBP	5.01	□□□□□ -1.61
RPN5	YDL147W	RPL12B	P0CX54	165 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	MRS3	P10566	314 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	RIB5	P38145	238 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	YJL070C	P40361	888 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	SNL1	P40548	159 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	DAP1	Q12091	152 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	AYT1	Q12226	474 aa		5.01	□□□□□ -1.61
RPN5	YDL147W	RPL15A	P05748	204 aa	Known RBP	5	□□□□□ -1.61
RPN5	YDL147W	THR4	P16120	514 aa	Known RBP	5	□□□□□ -1.61
RPN5	YDL147W	PSO2	P30620	661 aa		5	□□□□□ -1.61
RPN5	YDL147W	SUR1	P33300	382 aa		5	□□□□□ -1.61
RPN5	YDL147W	RRF1	P38771	230 aa		5	□□□□□ -1.61
RPN5	YDL147W	RPH1	P39956	796 aa		5	□□□□□ -1.61
RPN5	YDL147W	YFR016C	P43597	1233 aa	Known RBP	5	□□□□□ -1.61
RPN5	YDL147W	RRT5	P43607	289 aa		5	□□□□□ -1.61
RPN5	YDL147W	YPL068C	Q02749	293 aa		5	□□□□□ -1.61
RPN5	YDL147W	YMR181C	Q03231	154 aa		5	□□□□□ -1.61
RPN5	YDL147W	YMR310C	Q04867	317 aa	Predicted RBP	5	□□□□□ -1.61
RPN5	YDL147W	GRS2	Q06817	618 aa		5	□□□□□ -1.61
RPN5	YDL147W	AFT2	Q08957	416 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms