RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	CLB4	P24871	460 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	PCL2	P25693	308 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	RFA2	P26754	273 aa	Known RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	SDH3	P33421	198 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	PMT1	P33775	817 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	YHR127W	P38833	243 aa	Known RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	FMO1	P38866	432 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	NDE1	P40215	560 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	HPM1	P40481	377 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	MEP2	P41948	499 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	YJL163C	P46996	555 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	KEL2	P50090	882 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	YPT32	P51996	222 aa	Known RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	DIA3	P52290	468 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	YGR015C	P53208	328 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	EFR3	Q03653	782 aa	Known RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	YMR010W	Q03687	405 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	VHS1	Q03785	461 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	TRM12	Q04235	462 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	YMR226C	Q05016	267 aa	Known RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	YMR034C	Q05131	434 aa	Predicted RBP	4.88	□□□□□ -1.63
IWR1	YDL115C	ASM4	Q05166	528 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	NDL1	Q06568	189 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	GET4	Q12125	312 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	RGT2	Q12300	763 aa		4.88	□□□□□ -1.63
IWR1	YDL115C	ATP2	P00830	511 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	ARG3	P05150	338 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	SEC63	P14906	663 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	URA4	P20051	364 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	SGV1	P23293	657 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	OCA4	P25366	362 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	PPZ1	P26570	692 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	HOG1	P32485	435 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	MRPL17	P36528	281 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	MUM2	P38236	366 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	TAE1	P38340	232 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	INM1	P38710	295 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	RRP3	P38712	501 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	CAB2	P40506	365 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	GVP36	P40531	326 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	YNR061C	P53747	219 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	SPO19	Q03029	223 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	MET31	Q03081	177 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	RAD33	Q04231	177 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	YDR124W	Q04608	324 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	ENT2	Q05785	613 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	RAD34	Q06665	692 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	ATG10	Q07879	167 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	RPN8	Q08723	338 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	TRM8	Q12009	286 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	SLF1	Q12034	447 aa	Known RBP	4.87	□□□□□ -1.63
IWR1	YDL115C	DAP1	Q12091	152 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	RPN6	Q12377	434 aa		4.87	□□□□□ -1.63
IWR1	YDL115C	MRP13	P12686	339 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	PHO81	P17442	1178 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	ATO2	P32907	282 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	YKL097C	P34245	136 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	RMA1	P36001	430 aa	Known RBP	4.86	□□□□□ -1.63
IWR1	YDL115C	FTH1	P38310	465 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	FAA2	P39518	744 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	RGI1	P40043	161 aa	Predicted RBP	4.86	□□□□□ -1.63
IWR1	YDL115C	YJL070C	P40361	888 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	RIC1	P40395	1056 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	FMP32	P43557	207 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	GAT1	P43574	510 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	COQ5	P49017	307 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	TDA7	P53882	636 aa	Predicted RBP	4.86	□□□□□ -1.63
IWR1	YDL115C	YNL095C	P53932	642 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	AQR1	P53943	586 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	YNL033W	P53964	284 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	YNL019C	P53975	284 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	ECM9	Q02202	377 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	SMA1	Q02651	245 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	PEX12	Q04370	399 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	YMR111C	Q04461	462 aa	Predicted RBP	4.86	□□□□□ -1.63
IWR1	YDL115C	GAD1	Q04792	585 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	YHC1	Q05900	231 aa	Known RBP	4.86	□□□□□ -1.63
IWR1	YDL115C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
IWR1	YDL115C	PLB3	Q08108	686 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	VPS68	Q12016	184 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	NMD4	Q12129	218 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	PST1	Q12355	444 aa		4.86	□□□□□ -1.63
IWR1	YDL115C	PHO5	P00635	467 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	INH1	P01097	85 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	DST1	P07273	309 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	FBA1	P14540	359 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	YAK1	P14680	807 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	PEX3	P28795	441 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	CDC5	P32562	705 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	SSE2	P32590	693 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	PET127	P32606	800 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	AST1	P35183	429 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	ROT2	P38138	954 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	YBR071W	P38243	211 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	COS111	P38308	924 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	YPT35	P38815	214 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	RIX1	P38883	763 aa	Predicted RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	TIM17	P39515	158 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	YEL073C	P39974	107 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms