RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C RTT103Q05543 409 aa2.99□□□□□ -1.93
SHG1YBR258C PPT2Q12036 173 aa2.99□□□□□ -1.93
SHG1YBR258C ERP3Q12403 225 aa2.99□□□□□ -1.93
SHG1YBR258C SET6Q12529 373 aa2.99□□□□□ -1.93
SHG1YBR258C YLR422WQ06409 1932 aa2.99□□□□□ -1.93
SHG1YBR258C LEU4P06208 619 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C PHO2P07269 559 aa2.98□□□□□ -1.93
SHG1YBR258C RPL20AP0CX23 172 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C RPL20BP0CX24 172 aaPredicted RBP2.98□□□□□ -1.93
SHG1YBR258C SAM1P10659 382 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C PDX1P16451 410 aa2.98□□□□□ -1.93
SHG1YBR258C FUN19P28003 413 aaPredicted RBP2.98□□□□□ -1.93
SHG1YBR258C PRP21P32524 280 aaPredicted RBP2.98□□□□□ -1.93
SHG1YBR258C NIP100P33420 868 aa2.98□□□□□ -1.93
SHG1YBR258C HCS1P34243 683 aa2.98□□□□□ -1.93
SHG1YBR258C DBP7P36120 742 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C THI2P38141 450 aa2.98□□□□□ -1.93
SHG1YBR258C RFS1P38234 210 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C MTC4P38335 694 aaKnown RBP2.98□□□□□ -1.93
SHG1YBR258C RFC3P38629 340 aa2.98□□□□□ -1.93
SHG1YBR258C ALG8P40351 577 aa2.98□□□□□ -1.93
SHG1YBR258C YJL213WP40896 331 aa2.98□□□□□ -1.93
SHG1YBR258C ELP2P42935 788 aa2.98□□□□□ -1.93
SHG1YBR258C RRT5P43607 289 aa2.98□□□□□ -1.93
SHG1YBR258C FMS1P50264 508 aa2.98□□□□□ -1.93
SHG1YBR258C MNP1P53163 194 aaPredicted RBP2.98□□□□□ -1.93
SHG1YBR258C YMR155WQ03795 547 aa2.98□□□□□ -1.93
SHG1YBR258C YTH1Q06102 208 aaPredicted RBP2.98□□□□□ -1.93
SHG1YBR258C NSE1Q07913 336 aa2.98□□□□□ -1.93
SHG1YBR258C AYT1Q12226 474 aa2.98□□□□□ -1.93
SHG1YBR258C BRR2P32639 2163 aaKnown RBP2.97□□□□□ -1.93
SHG1YBR258C LAA1P39526 2014 aa2.97□□□□□ -1.93
SHG1YBR258C HEM2P05373 342 aa2.97□□□□□ -1.93
SHG1YBR258C RPL43AP0CX25 92 aaKnown RBP2.97□□□□□ -1.93
SHG1YBR258C RPL43BP0CX26 92 aa2.97□□□□□ -1.93
SHG1YBR258C RPL3P14126 387 aaKnown RBP2.97□□□□□ -1.93
SHG1YBR258C SNA3P14359 133 aa2.97□□□□□ -1.93
SHG1YBR258C PPH22P23595 377 aa2.97□□□□□ -1.93
SHG1YBR258C ADK2P26364 225 aa2.97□□□□□ -1.93
SHG1YBR258C ATS1P31386 333 aa2.97□□□□□ -1.93
SHG1YBR258C REC114P32841 428 aa2.97□□□□□ -1.93
SHG1YBR258C PTK1P36002 662 aaPredicted RBP2.97□□□□□ -1.93
SHG1YBR258C CBP4P37267 147 aa2.97□□□□□ -1.93
SHG1YBR258C SLX1P38324 304 aa2.97□□□□□ -1.93
SHG1YBR258C POP1P41812 875 aa2.97□□□□□ -1.93
SHG1YBR258C TRS85P46944 698 aa2.97□□□□□ -1.93
SHG1YBR258C YGL260WP53056 76 aa2.97□□□□□ -1.93
SHG1YBR258C RKM1Q08961 583 aaPredicted RBP2.97□□□□□ -1.93
SHG1YBR258C CTF3Q12748 733 aa2.97□□□□□ -1.93
SHG1YBR258C PRP16P15938 1071 aaPredicted RBP2.96□□□□□ -1.94
SHG1YBR258C MCK1P21965 375 aaKnown RBP2.96□□□□□ -1.94
SHG1YBR258C YCR051WP25631 222 aa2.96□□□□□ -1.94
SHG1YBR258C CRM1P30822 1084 aaKnown RBP2.96□□□□□ -1.94
SHG1YBR258C SIN4P32259 974 aa2.96□□□□□ -1.94
SHG1YBR258C YME2P32843 850 aa2.96□□□□□ -1.94
SHG1YBR258C TIF5P38431 405 aaKnown RBP2.96□□□□□ -1.94
SHG1YBR258C IDP2P41939 412 aa2.96□□□□□ -1.94
SHG1YBR258C COS5P47187 383 aa2.96□□□□□ -1.94
SHG1YBR258C KAP120Q02932 1032 aa2.96□□□□□ -1.94
SHG1YBR258C RRP45Q05636 305 aaKnown RBP2.96□□□□□ -1.94
SHG1YBR258C COS7Q07788 383 aa2.96□□□□□ -1.94
SHG1YBR258C GDH1P07262 454 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C REC107P21651 314 aa2.95□□□□□ -1.94
SHG1YBR258C URA7P28274 579 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C PRO3P32263 286 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C NIP1P32497 812 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C FRE2P36033 711 aa2.95□□□□□ -1.94
SHG1YBR258C UTH1P36135 365 aa2.95□□□□□ -1.94
SHG1YBR258C TOM22P49334 152 aa2.95□□□□□ -1.94
SHG1YBR258C MSO1P53604 210 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C BNI5P53890 448 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C IMP4P53941 290 aaKnown RBP2.95□□□□□ -1.94
SHG1YBR258C SKO1Q02100 647 aa2.95□□□□□ -1.94
SHG1YBR258C ODC1Q03028 310 aa2.95□□□□□ -1.94
SHG1YBR258C HSP31Q04432 237 aa2.95□□□□□ -1.94
SHG1YBR258C DON1Q05610 365 aa2.95□□□□□ -1.94
SHG1YBR258C MDM30Q05930 598 aa2.95□□□□□ -1.94
SHG1YBR258C YLR345WQ06137 509 aa2.95□□□□□ -1.94
SHG1YBR258C SIL1Q08199 421 aa2.95□□□□□ -1.94
SHG1YBR258C SAC3P46674 1301 aa2.94□□□□□ -1.94
SHG1YBR258C PMR1P13586 950 aa2.94□□□□□ -1.94
SHG1YBR258C AGA1P32323 725 aa2.94□□□□□ -1.94
SHG1YBR258C NDI1P32340 513 aa2.94□□□□□ -1.94
SHG1YBR258C ECM25P32525 599 aa2.94□□□□□ -1.94
SHG1YBR258C STB6P36085 766 aa2.94□□□□□ -1.94
SHG1YBR258C ARA1P38115 344 aa2.94□□□□□ -1.94
SHG1YBR258C NTC20P38302 140 aaPredicted RBP2.94□□□□□ -1.94
SHG1YBR258C VHC1P38329 1120 aa2.94□□□□□ -1.94
SHG1YBR258C CCT4P39078 528 aaKnown RBP2.94□□□□□ -1.94
SHG1YBR258C YJL132WP47014 750 aa2.94□□□□□ -1.94
SHG1YBR258C YJR011CP47086 261 aaPredicted RBP2.94□□□□□ -1.94
SHG1YBR258C ERB1Q04660 807 aaKnown RBP2.94□□□□□ -1.94
SHG1YBR258C ROY1Q04847 553 aa2.94□□□□□ -1.94
SHG1YBR258C TLG2Q08144 397 aa2.94□□□□□ -1.94
SHG1YBR258C TIP41Q12199 356 aa2.94□□□□□ -1.94
SHG1YBR258C VAM3Q12241 283 aa2.94□□□□□ -1.94
SHG1YBR258C HSP42Q12329 375 aa2.94□□□□□ -1.94
SHG1YBR258C HIS4P00815 799 aaKnown RBP2.93□□□□□ -1.94
SHG1YBR258C SCEIP03882 235 aa2.93□□□□□ -1.94
SHG1YBR258C YCR100CP25606 316 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms