RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W RMD5Q12508 421 aa2.79□□□□□ -1.96
SWD3YBR175W DCP1Q12517 231 aaPredicted RBP2.79□□□□□ -1.96
SWD3YBR175W CAR2P07991 424 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W CHS1P08004 1131 aa2.78□□□□□ -1.96
SWD3YBR175W TUB1P09733 447 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W PEP5P12868 1029 aa2.78□□□□□ -1.96
SWD3YBR175W SAR1P20606 190 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W VPS3P23643 1011 aa2.78□□□□□ -1.96
SWD3YBR175W YUR1P26725 428 aa2.78□□□□□ -1.96
SWD3YBR175W FUN19P28003 413 aaPredicted RBP2.78□□□□□ -1.96
SWD3YBR175W YPS1P32329 569 aa2.78□□□□□ -1.96
SWD3YBR175W MSS51P32335 436 aa2.78□□□□□ -1.96
SWD3YBR175W CYS4P32582 507 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W SPR1P32603 445 aa2.78□□□□□ -1.96
SWD3YBR175W FRE1P32791 686 aa2.78□□□□□ -1.96
SWD3YBR175W BUD2P33314 1104 aa2.78□□□□□ -1.96
SWD3YBR175W YHR122WP38829 231 aa2.78□□□□□ -1.96
SWD3YBR175W RCY1P39531 840 aa2.78□□□□□ -1.96
SWD3YBR175W PRP39P39682 629 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W PAC2P39937 518 aa2.78□□□□□ -1.96
SWD3YBR175W AIM10P39965 576 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W ALD5P40047 520 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W YIL060WP40519 144 aa2.78□□□□□ -1.96
SWD3YBR175W SNL1P40548 159 aa2.78□□□□□ -1.96
SWD3YBR175W INA22P40576 216 aa2.78□□□□□ -1.96
SWD3YBR175W YPS6P40583 537 aa2.78□□□□□ -1.96
SWD3YBR175W YJR154WP47181 346 aa2.78□□□□□ -1.96
SWD3YBR175W RAD17P48581 401 aa2.78□□□□□ -1.96
SWD3YBR175W MRK1P50873 501 aa2.78□□□□□ -1.96
SWD3YBR175W YNL134CP53912 376 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W ASI1P54074 624 aa2.78□□□□□ -1.96
SWD3YBR175W SHR3Q02774 210 aa2.78□□□□□ -1.96
SWD3YBR175W APC4Q04601 652 aa2.78□□□□□ -1.96
SWD3YBR175W BCP1Q06338 283 aa2.78□□□□□ -1.96
SWD3YBR175W AAD15Q08361 143 aa2.78□□□□□ -1.96
SWD3YBR175W GEP3Q08622 556 aa2.78□□□□□ -1.96
SWD3YBR175W BUG1Q12191 341 aa2.78□□□□□ -1.96
SWD3YBR175W LSP1Q12230 341 aaKnown RBP2.78□□□□□ -1.96
SWD3YBR175W MED4Q12343 284 aa2.78□□□□□ -1.96
SWD3YBR175W FMP16Q12497 93 aa2.78□□□□□ -1.96
SWD3YBR175W YPT1P01123 206 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W PRB1P09232 635 aa2.77□□□□□ -1.97
SWD3YBR175W HEM1P09950 548 aaPredicted RBP2.77□□□□□ -1.97
SWD3YBR175W IMA3P0CW40 589 aa2.77□□□□□ -1.97
SWD3YBR175W IMA4P0CW41 589 aa2.77□□□□□ -1.97
SWD3YBR175W BAR1P12630 587 aa2.77□□□□□ -1.97
SWD3YBR175W SPO11P23179 398 aa2.77□□□□□ -1.97
SWD3YBR175W RPI1P23250 407 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W RAD57P25301 460 aa2.77□□□□□ -1.97
SWD3YBR175W PPZ1P26570 692 aa2.77□□□□□ -1.97
SWD3YBR175W MSK1P32048 576 aa2.77□□□□□ -1.97
SWD3YBR175W SMY1P32364 656 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W RAD23P32628 398 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W RAD24P32641 659 aa2.77□□□□□ -1.97
SWD3YBR175W PPZ2P33329 710 aa2.77□□□□□ -1.97
SWD3YBR175W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SWD3YBR175W SPT10P35208 640 aa2.77□□□□□ -1.97
SWD3YBR175W OCT1P35999 772 aa2.77□□□□□ -1.97
SWD3YBR175W CAB3P36076 571 aa2.77□□□□□ -1.97
SWD3YBR175W RTC2P38279 296 aa2.77□□□□□ -1.97
SWD3YBR175W LAG1P38703 411 aa2.77□□□□□ -1.97
SWD3YBR175W TCD1P38756 429 aa2.77□□□□□ -1.97
SWD3YBR175W PET100P38958 111 aa2.77□□□□□ -1.97
SWD3YBR175W EXO1P39875 702 aa2.77□□□□□ -1.97
SWD3YBR175W YER079WP40052 210 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W TRS85P46944 698 aa2.77□□□□□ -1.97
SWD3YBR175W LOH1P47055 219 aa2.77□□□□□ -1.97
SWD3YBR175W IMD3P50095 523 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W ORC5P50874 479 aa2.77□□□□□ -1.97
SWD3YBR175W PMT5P52867 743 aa2.77□□□□□ -1.97
SWD3YBR175W MNT4P53745 580 aa2.77□□□□□ -1.97
SWD3YBR175W YIF1P53845 314 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W DSL1P53847 754 aa2.77□□□□□ -1.97
SWD3YBR175W YPL014WQ02606 381 aa2.77□□□□□ -1.97
SWD3YBR175W PET117Q02771 107 aa2.77□□□□□ -1.97
SWD3YBR175W GIP3Q03016 1276 aa2.77□□□□□ -1.97
SWD3YBR175W TAF12Q03761 539 aa2.77□□□□□ -1.97
SWD3YBR175W NUP53Q03790 475 aa2.77□□□□□ -1.97
SWD3YBR175W YMR087WQ04299 284 aa2.77□□□□□ -1.97
SWD3YBR175W RRN11Q04712 507 aa2.77□□□□□ -1.97
SWD3YBR175W COQ11Q05892 277 aa2.77□□□□□ -1.97
SWD3YBR175W SNT309Q06091 175 aaPredicted RBP2.77□□□□□ -1.97
SWD3YBR175W ECM7Q06200 448 aa2.77□□□□□ -1.97
SWD3YBR175W SYO1Q07395 620 aa2.77□□□□□ -1.97
SWD3YBR175W MCH4Q08268 501 aa2.77□□□□□ -1.97
SWD3YBR175W IMA2Q08295 589 aa2.77□□□□□ -1.97
SWD3YBR175W CLP1Q08685 445 aaPredicted RBP2.77□□□□□ -1.97
SWD3YBR175W GLE1Q12315 538 aa2.77□□□□□ -1.97
SWD3YBR175W YDR262WQ12331 272 aa2.77□□□□□ -1.97
SWD3YBR175W FRE7Q12333 620 aa2.77□□□□□ -1.97
SWD3YBR175W RNH203Q12338 110 aa2.77□□□□□ -1.97
SWD3YBR175W AIM45Q12480 344 aaKnown RBP2.77□□□□□ -1.97
SWD3YBR175W NTE1Q04958 1679 aa2.76□□□□□ -1.97
SWD3YBR175W SUC2P00724 532 aa2.76□□□□□ -1.97
SWD3YBR175W BI2P03873 423 aa2.76□□□□□ -1.97
SWD3YBR175W OPI3P05375 206 aa2.76□□□□□ -1.97
SWD3YBR175W ARG80P07249 177 aa2.76□□□□□ -1.97
SWD3YBR175W DST1P07273 309 aa2.76□□□□□ -1.97
SWD3YBR175W YLL053CP0CD98 152 aa2.76□□□□□ -1.97
SWD3YBR175W MSS116P15424 664 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms