RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C PNG1Q02890 363 aa4.08□□□□□ -1.76
NPL4YBR170C YMR310CQ04867 317 aaPredicted RBP4.08□□□□□ -1.76
NPL4YBR170C YLR297WQ05899 129 aa4.08□□□□□ -1.76
NPL4YBR170C YLH47Q06493 454 aa4.08□□□□□ -1.76
NPL4YBR170C YPR078CQ06813 372 aa4.08□□□□□ -1.76
NPL4YBR170C SYO1Q07395 620 aa4.08□□□□□ -1.76
NPL4YBR170C SKI7Q08491 747 aaPredicted RBP4.08□□□□□ -1.76
NPL4YBR170C CRC1Q12289 327 aa4.08□□□□□ -1.76
NPL4YBR170C RNR2P09938 399 aaKnown RBP4.07□□□□□ -1.76
NPL4YBR170C HXT2P23585 541 aa4.07□□□□□ -1.76
NPL4YBR170C FRE2P36033 711 aa4.07□□□□□ -1.76
NPL4YBR170C YCR041WP37265 110 aa4.07□□□□□ -1.76
NPL4YBR170C LYS1P38998 373 aaRIP-Chip data4.07□□□□□ -1.76not detected
NPL4YBR170C VPS52P39904 641 aa4.07□□□□□ -1.76
NPL4YBR170C SPG5P42933 373 aa4.07□□□□□ -1.76
NPL4YBR170C BNA3P47039 444 aaKnown RBP4.07□□□□□ -1.76
NPL4YBR170C MPS1P54199 764 aa4.07□□□□□ -1.76
NPL4YBR170C MMT1Q03218 510 aa4.07□□□□□ -1.76
NPL4YBR170C GRX3Q03835 250 aa4.07□□□□□ -1.76
NPL4YBR170C MRPL51Q06090 140 aaPredicted RBP4.07□□□□□ -1.76
NPL4YBR170C SEC62P21825 274 aa4.07□□□□□ -1.76
NPL4YBR170C HMX1P32339 317 aa4.07□□□□□ -1.76
NPL4YBR170C SKN1P33336 771 aa4.07□□□□□ -1.76
NPL4YBR170C SCO2P38072 301 aa4.07□□□□□ -1.76
NPL4YBR170C RIM2P38127 377 aa4.07□□□□□ -1.76
NPL4YBR170C YHR122WP38829 231 aa4.07□□□□□ -1.76
NPL4YBR170C GUF1P46943 645 aa4.07□□□□□ -1.76
NPL4YBR170C PHB2P50085 310 aa4.07□□□□□ -1.76
NPL4YBR170C ERG13P54839 491 aaKnown RBP4.07□□□□□ -1.76
NPL4YBR170C TIM11P81449 96 aaPredicted RBP4.07□□□□□ -1.76
NPL4YBR170C IRC15Q02733 499 aa4.07□□□□□ -1.76
NPL4YBR170C ECM18Q04623 453 aa4.07□□□□□ -1.76
NPL4YBR170C ATX2Q12067 313 aa4.07□□□□□ -1.76
NPL4YBR170C YDL009CQ12210 107 aa4.07□□□□□ -1.76
NPL4YBR170C MRPL23Q12487 163 aaPredicted RBP4.07□□□□□ -1.76
NPL4YBR170C RPL42AP0CX27 106 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C RPL42BP0CX28 106 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C YER190C-BP0CX94 160 aa4.06□□□□□ -1.76
NPL4YBR170C YEL077W-AP0CX95 160 aa4.06□□□□□ -1.76
NPL4YBR170C YGR296C-BP0CX96 160 aa4.06□□□□□ -1.76
NPL4YBR170C YPL283W-BP0CX97 160 aa4.06□□□□□ -1.76
NPL4YBR170C YPR204C-AP0CX98 160 aa4.06□□□□□ -1.76
NPL4YBR170C SLM5P25345 492 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C SPT10P35208 640 aa4.06□□□□□ -1.76
NPL4YBR170C ALP1P38971 573 aa4.06□□□□□ -1.76
NPL4YBR170C YFR016CP43597 1233 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C YGL114WP53134 725 aa4.06□□□□□ -1.76
NPL4YBR170C FRE4P53746 719 aa4.06□□□□□ -1.76
NPL4YBR170C TDA7P53882 636 aaPredicted RBP4.06□□□□□ -1.76
NPL4YBR170C RPL15BP54780 204 aaPredicted RBP4.06□□□□□ -1.76
NPL4YBR170C RLI1Q03195 608 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C SGT1Q08446 395 aa4.06□□□□□ -1.76
NPL4YBR170C AIM45Q12480 344 aaKnown RBP4.06□□□□□ -1.76
NPL4YBR170C PGK1P00560 416 aaKnown RBP4.05□□□□□ -1.76
NPL4YBR170C PRP16P15938 1071 aaPredicted RBP4.05□□□□□ -1.76
NPL4YBR170C SPO12P17123 173 aa4.05□□□□□ -1.76
NPL4YBR170C HNM1P19807 563 aa4.05□□□□□ -1.76
NPL4YBR170C LSB5P25369 354 aa4.05□□□□□ -1.76
NPL4YBR170C YCR100CP25606 316 aa4.05□□□□□ -1.76
NPL4YBR170C MSK1P32048 576 aa4.05□□□□□ -1.76
NPL4YBR170C YKL097CP34245 136 aa4.05□□□□□ -1.76
NPL4YBR170C MIC60P36112 540 aa4.05□□□□□ -1.76
NPL4YBR170C END3P39013 349 aa4.05□□□□□ -1.76
NPL4YBR170C PCL6P40038 420 aa4.05□□□□□ -1.76
NPL4YBR170C SNL1P40548 159 aa4.05□□□□□ -1.76
NPL4YBR170C PNC1P53184 216 aaKnown RBP4.05□□□□□ -1.76
NPL4YBR170C RET3P53600 189 aa4.05□□□□□ -1.76
NPL4YBR170C YNL146WP53906 100 aa4.05□□□□□ -1.76
NPL4YBR170C RSN1Q03516 953 aa4.05□□□□□ -1.76
NPL4YBR170C ARR1Q06596 294 aa4.05□□□□□ -1.76
NPL4YBR170C YAP7Q08182 245 aa4.05□□□□□ -1.76
NPL4YBR170C SUP35P05453 685 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C YAR066WP0CX18 203 aa4.04□□□□□ -1.76
NPL4YBR170C YHR214WP0CX19 203 aa4.04□□□□□ -1.76
NPL4YBR170C DBR1P24309 405 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C ERG1P32476 496 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C SWC5P38326 303 aa4.04□□□□□ -1.76
NPL4YBR170C TIF5P38431 405 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C MMF1P40185 145 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C GCD14P46959 383 aaPredicted RBP4.04□□□□□ -1.76
NPL4YBR170C YHC3P47040 408 aa4.04□□□□□ -1.76
NPL4YBR170C TOS2P50078 622 aa4.04□□□□□ -1.76
NPL4YBR170C YGL082WP53155 381 aa4.04□□□□□ -1.76
NPL4YBR170C BET4Q00618 327 aa4.04□□□□□ -1.76
NPL4YBR170C RRN5Q02983 363 aa4.04□□□□□ -1.76
NPL4YBR170C CAB5Q03941 241 aa4.04□□□□□ -1.76
NPL4YBR170C COQ11Q05892 277 aa4.04□□□□□ -1.76
NPL4YBR170C KAP95Q06142 861 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C VPS74Q06385 345 aa4.04□□□□□ -1.76
NPL4YBR170C GEP3Q08622 556 aa4.04□□□□□ -1.76
NPL4YBR170C SRL2Q12020 392 aa4.04□□□□□ -1.76
NPL4YBR170C YPR022CQ12139 1133 aa4.04□□□□□ -1.76
NPL4YBR170C ICT1Q12385 394 aa4.04□□□□□ -1.76
NPL4YBR170C RNA1P11745 407 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C AIM17P23180 465 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C YNK1P36010 153 aaKnown RBP4.04□□□□□ -1.76
NPL4YBR170C RSM22P36056 628 aa4.04□□□□□ -1.76
NPL4YBR170C GCD10P41814 478 aa4.04□□□□□ -1.76
NPL4YBR170C STE24P47154 453 aa4.04□□□□□ -1.76
NPL4YBR170C RIB4P50861 169 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms