RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C REC107P21651 314 aa2.18□□□□□ -2.06
RPB5YBR154C PRR1P28708 518 aa2.18□□□□□ -2.06
RPB5YBR154C PMT1P33775 817 aa2.18□□□□□ -2.06
RPB5YBR154C SAS3P34218 831 aa2.18□□□□□ -2.06
RPB5YBR154C RTC2P38279 296 aa2.18□□□□□ -2.06
RPB5YBR154C TIM17P39515 158 aa2.18□□□□□ -2.06
RPB5YBR154C HXT14P42833 540 aa2.18□□□□□ -2.06
RPB5YBR154C RHO5P53879 331 aaKnown RBP2.18□□□□□ -2.06
RPB5YBR154C VPS9P54787 451 aa2.18□□□□□ -2.06
RPB5YBR154C YLR345WQ06137 509 aa2.18□□□□□ -2.06
RPB5YBR154C VTA1Q06263 330 aa2.18□□□□□ -2.06
RPB5YBR154C BI3Q9ZZW7 517 aa2.18□□□□□ -2.06
RPB5YBR154C AAT2P23542 418 aaKnown RBP2.17□□□□□ -2.06
RPB5YBR154C YCR051WP25631 222 aa2.17□□□□□ -2.06
RPB5YBR154C SWI3P32591 825 aa2.17□□□□□ -2.06
RPB5YBR154C PCF11P39081 626 aaPredicted RBP2.17□□□□□ -2.06
RPB5YBR154C DLD2P46681 530 aaKnown RBP2.17□□□□□ -2.06
RPB5YBR154C HMS2P47175 358 aa2.17□□□□□ -2.06
RPB5YBR154C IGO1P53897 168 aa2.17□□□□□ -2.06
RPB5YBR154C RPA49Q01080 415 aaPredicted RBP2.17□□□□□ -2.06
RPB5YBR154C CIK1Q01649 594 aa2.17□□□□□ -2.06
RPB5YBR154C BET5Q03630 159 aa2.17□□□□□ -2.06
RPB5YBR154C ERB1Q04660 807 aaKnown RBP2.17□□□□□ -2.06
RPB5YBR154C LIP2Q06005 328 aa2.17□□□□□ -2.06
RPB5YBR154C YRF1-4O13559 1382 aa2.17□□□□□ -2.06
RPB5YBR154C CLB1P24868 471 aa2.16□□□□□ -2.06
RPB5YBR154C URA7P28274 579 aaKnown RBP2.16□□□□□ -2.06
RPB5YBR154C CYS4P32582 507 aaKnown RBP2.16□□□□□ -2.06
RPB5YBR154C IES6P32617 166 aa2.16□□□□□ -2.06
RPB5YBR154C BMT2P38278 337 aa2.16□□□□□ -2.06
RPB5YBR154C APE4P38821 490 aa2.16□□□□□ -2.06
RPB5YBR154C JEM1P40358 645 aa2.16□□□□□ -2.06
RPB5YBR154C AZR1P50080 613 aa2.16□□□□□ -2.06
RPB5YBR154C FLC3P53121 802 aa2.16□□□□□ -2.06
RPB5YBR154C BNI5P53890 448 aaKnown RBP2.16□□□□□ -2.06
RPB5YBR154C YPS3Q12303 508 aa2.16□□□□□ -2.06
RPB5YBR154C ORT1Q12375 292 aa2.16□□□□□ -2.06
RPB5YBR154C GPH1P06738 902 aaKnown RBP2.15□□□□□ -2.07
RPB5YBR154C RPL3P14126 387 aaKnown RBP2.15□□□□□ -2.07
RPB5YBR154C MDH1P17505 334 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
RPB5YBR154C SPO7P18410 259 aa2.15□□□□□ -2.07
RPB5YBR154C OPI1P21957 404 aa2.15□□□□□ -2.07
RPB5YBR154C APE3P37302 537 aaKnown RBP2.15□□□□□ -2.07
RPB5YBR154C VHC1P38329 1120 aa2.15□□□□□ -2.07
RPB5YBR154C JLP2P40206 208 aa2.15□□□□□ -2.07
RPB5YBR154C BUD27P43573 796 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
RPB5YBR154C YFR057WP43625 151 aa2.15□□□□□ -2.07
RPB5YBR154C MNP1P53163 194 aaPredicted RBP2.15□□□□□ -2.07
RPB5YBR154C CRH1P53301 507 aa2.15□□□□□ -2.07
RPB5YBR154C NUP116Q02630 1113 aa2.15□□□□□ -2.07
RPB5YBR154C KAP120Q02932 1032 aa2.15□□□□□ -2.07
RPB5YBR154C ERO1Q03103 563 aa2.15□□□□□ -2.07
RPB5YBR154C ARX1Q03862 593 aaKnown RBP2.15□□□□□ -2.07
RPB5YBR154C ROY1Q04847 553 aa2.15□□□□□ -2.07
RPB5YBR154C SKI7Q08491 747 aaPredicted RBP2.15□□□□□ -2.07
RPB5YBR154C AFI1Q99222 893 aa2.15□□□□□ -2.07
RPB5YBR154C ISN1Q99312 450 aa2.15□□□□□ -2.07
RPB5YBR154C RPB5P20434 215 aa2.14□□□□□ -2.07
RPB5YBR154C CPR2P23285 205 aa2.14□□□□□ -2.07
RPB5YBR154C HXT3P32466 567 aaKnown RBP2.14□□□□□ -2.07
RPB5YBR154C HIR2P32480 875 aa2.14□□□□□ -2.07
RPB5YBR154C YME2P32843 850 aa2.14□□□□□ -2.07
RPB5YBR154C YER186CP40101 306 aa2.14□□□□□ -2.07
RPB5YBR154C YIL029CP40538 142 aa2.14□□□□□ -2.07
RPB5YBR154C VMA13P41807 478 aaKnown RBP2.14□□□□□ -2.07
RPB5YBR154C ZIM17P42844 174 aa2.14□□□□□ -2.07
RPB5YBR154C CAK1P43568 368 aaPredicted RBP2.14□□□□□ -2.07
RPB5YBR154C FMS1P50264 508 aa2.14□□□□□ -2.07
RPB5YBR154C MRPS16Q02608 121 aa2.14□□□□□ -2.07
RPB5YBR154C BCH1Q05029 724 aa2.14□□□□□ -2.07
RPB5YBR154C DON1Q05610 365 aa2.14□□□□□ -2.07
RPB5YBR154C AHC1Q12433 566 aa2.14□□□□□ -2.07
RPB5YBR154C PRM7Q12459 698 aa2.14□□□□□ -2.07
RPB5YBR154C RMD5Q12508 421 aa2.14□□□□□ -2.07
RPB5YBR154C COX4P04037 155 aa2.13□□□□□ -2.07
RPB5YBR154C CBP6P07253 162 aaPredicted RBP2.13□□□□□ -2.07
RPB5YBR154C CLN1P20437 546 aa2.13□□□□□ -2.07
RPB5YBR154C PPH22P23595 377 aa2.13□□□□□ -2.07
RPB5YBR154C ERV1P27882 189 aa2.13□□□□□ -2.07
RPB5YBR154C VPH1P32563 840 aaKnown RBP2.13□□□□□ -2.07
RPB5YBR154C TFB1P32776 642 aa2.13□□□□□ -2.07
RPB5YBR154C MDL1P33310 695 aa2.13□□□□□ -2.07
RPB5YBR154C SAS2P40963 338 aa2.13□□□□□ -2.07
RPB5YBR154C YJR011CP47086 261 aaPredicted RBP2.13□□□□□ -2.07
RPB5YBR154C BIR1P47134 954 aa2.13□□□□□ -2.07
RPB5YBR154C TCB2P48231 1178 aa2.13□□□□□ -2.07
RPB5YBR154C OAZ1Q02803 292 aa2.13□□□□□ -2.07
RPB5YBR154C RRP45Q05636 305 aaKnown RBP2.13□□□□□ -2.07
RPB5YBR154C RIF2Q06208 395 aa2.13□□□□□ -2.07
RPB5YBR154C CMS1Q07897 291 aaKnown RBP2.13□□□□□ -2.07
RPB5YBR154C DNL4Q08387 944 aaPredicted RBP2.13□□□□□ -2.07
RPB5YBR154C PAR32Q12515 295 aaKnown RBP2.13□□□□□ -2.07
RPB5YBR154C RIP1P08067 215 aa2.12□□□□□ -2.07
RPB5YBR154C MNE1P24720 663 aa2.12□□□□□ -2.07
RPB5YBR154C PUP2P32379 260 aa2.12□□□□□ -2.07
RPB5YBR154C NTC20P38302 140 aaPredicted RBP2.12□□□□□ -2.07
RPB5YBR154C OXA1P39952 402 aa2.12□□□□□ -2.07
RPB5YBR154C GDI1P39958 451 aaKnown RBP2.12□□□□□ -2.07
RPB5YBR154C SEC28P40509 296 aaKnown RBP2.12□□□□□ -2.07
RPB5YBR154C LCB2P40970 561 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms