RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W DST1P07273 309 aa5.43□□□□□ -1.54
SHP1YBL058W RPS17BP14127 136 aaKnown RBP5.43□□□□□ -1.54
SHP1YBL058W FPS1P23900 669 aa5.43□□□□□ -1.54
SHP1YBL058W YME1P32795 747 aa5.43□□□□□ -1.54
SHP1YBL058W DHR2P36009 735 aaPredicted RBP5.43□□□□□ -1.54
SHP1YBL058W YIL165CP40446 119 aa5.43□□□□□ -1.54
SHP1YBL058W YIL067CP40514 678 aa5.43□□□□□ -1.54
SHP1YBL058W YJL043WP47053 257 aa5.43□□□□□ -1.54
SHP1YBL058W PBP1P53297 722 aaKnown RBP5.43□□□□□ -1.54
SHP1YBL058W MAL13P53338 473 aa5.43□□□□□ -1.54
SHP1YBL058W EMG1Q06287 252 aaKnown RBP5.43□□□□□ -1.54
SHP1YBL058W YOL019WQ08157 551 aa5.43□□□□□ -1.54
SHP1YBL058W YOR223WQ12015 292 aa5.43□□□□□ -1.54
SHP1YBL058W YLR053CQ12026 108 aa5.43□□□□□ -1.54
SHP1YBL058W NUR1Q12066 484 aa5.43□□□□□ -1.54
SHP1YBL058W RRP36Q12481 300 aaPredicted RBP5.43□□□□□ -1.54
SHP1YBL058W FLP1P03870 423 aa5.42□□□□□ -1.54
SHP1YBL058W ARG4P04076 463 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W HXK2P04807 486 aaKnown RBP5.42□□□□□ -1.54
SHP1YBL058W YSF3P0C074 85 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W COS2P0CX12 379 aa5.42□□□□□ -1.54
SHP1YBL058W COS3P0CX13 379 aa5.42□□□□□ -1.54
SHP1YBL058W DAP2P18962 818 aa5.42□□□□□ -1.54
SHP1YBL058W GPI12P23797 304 aa5.42□□□□□ -1.54
SHP1YBL058W VPS21P36017 210 aaKnown RBP5.42□□□□□ -1.54
SHP1YBL058W ATG7P38862 630 aa5.42□□□□□ -1.54
SHP1YBL058W YDR089WP38966 869 aa5.42□□□□□ -1.54
SHP1YBL058W COS4P43542 379 aa5.42□□□□□ -1.54
SHP1YBL058W ECO1P43605 281 aa5.42□□□□□ -1.54
SHP1YBL058W IRC6P43615 237 aa5.42□□□□□ -1.54
SHP1YBL058W YJR141WP47172 347 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W PRP31P49704 494 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W IST1P53843 298 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W SKI8Q02793 397 aaPredicted RBP5.42□□□□□ -1.54
SHP1YBL058W SWF1Q04629 336 aa5.42□□□□□ -1.54
SHP1YBL058W YLR352WQ06479 807 aa5.42□□□□□ -1.54
SHP1YBL058W YPR172WQ06608 200 aa5.42□□□□□ -1.54
SHP1YBL058W ESA1Q08649 445 aa5.42□□□□□ -1.54
SHP1YBL058W NOP14Q99207 810 aaKnown RBP5.42□□□□□ -1.54
SHP1YBL058W YOS9Q99220 542 aa5.42□□□□□ -1.54
SHP1YBL058W YOR019WQ99248 730 aa5.42□□□□□ -1.54
SHP1YBL058W NMT1P14743 455 aa5.41□□□□□ -1.54
SHP1YBL058W CBS2P14905 389 aa5.41□□□□□ -1.54
SHP1YBL058W SLM5P25345 492 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W ARE1P25628 610 aa5.41□□□□□ -1.54
SHP1YBL058W NFU1P32860 256 aa5.41□□□□□ -1.54
SHP1YBL058W SET3P36124 751 aa5.41□□□□□ -1.54
SHP1YBL058W GLY1P37303 387 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W MNN2P38069 597 aa5.41□□□□□ -1.54
SHP1YBL058W APE4P38821 490 aa5.41□□□□□ -1.54
SHP1YBL058W OAF1P39720 1047 aaPredicted RBP5.41□□□□□ -1.54
SHP1YBL058W ARB1P40024 610 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W GIP2P40036 548 aa5.41□□□□□ -1.54
SHP1YBL058W PKP1P40530 394 aa5.41□□□□□ -1.54
SHP1YBL058W CIN1P40987 1014 aa5.41□□□□□ -1.54
SHP1YBL058W PSA1P41940 361 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W MEP2P41948 499 aa5.41□□□□□ -1.54
SHP1YBL058W URB2P47108 1174 aa5.41□□□□□ -1.54
SHP1YBL058W GTR2P53290 341 aa5.41□□□□□ -1.54
SHP1YBL058W RCF2P53721 224 aa5.41□□□□□ -1.54
SHP1YBL058W ALG12P53730 551 aa5.41□□□□□ -1.54
SHP1YBL058W PDR16P53860 351 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W CGI121Q03705 181 aaKnown RBP5.41□□□□□ -1.54
SHP1YBL058W USA1Q03714 838 aa5.41□□□□□ -1.54
SHP1YBL058W YMR111CQ04461 462 aaPredicted RBP5.41□□□□□ -1.54
SHP1YBL058W YDL121CQ07541 149 aa5.41□□□□□ -1.54
SHP1YBL058W GET4Q12125 312 aa5.41□□□□□ -1.54
SHP1YBL058W TY1A-BLQ12266 440 aa5.41□□□□□ -1.54
SHP1YBL058W YVC1Q12324 675 aa5.41□□□□□ -1.54
SHP1YBL058W ERG8P24521 451 aa5.4□□□□□ -1.54
SHP1YBL058W SNU114P36048 1008 aaKnown RBP5.4□□□□□ -1.54
SHP1YBL058W YCR087C-AP37263 153 aa5.4□□□□□ -1.54
SHP1YBL058W RIM2P38127 377 aa5.4□□□□□ -1.54
SHP1YBL058W GRE3P38715 327 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
SHP1YBL058W FMP32P43557 207 aa5.4□□□□□ -1.54
SHP1YBL058W UBP6P43593 499 aaKnown RBP5.4□□□□□ -1.54
SHP1YBL058W ALB1P47019 175 aaPredicted RBP5.4□□□□□ -1.54
SHP1YBL058W YJR039WP47107 1121 aa5.4□□□□□ -1.54
SHP1YBL058W EMC2P47133 292 aaKnown RBP5.4□□□□□ -1.54
SHP1YBL058W ATP22P50273 684 aaPredicted RBP5.4□□□□□ -1.54
SHP1YBL058W SKP1P52286 194 aa5.4□□□□□ -1.54
SHP1YBL058W YNR040WP53736 256 aa5.4□□□□□ -1.54
SHP1YBL058W EFR3Q03653 782 aaKnown RBP5.4□□□□□ -1.54
SHP1YBL058W YTM1Q12024 460 aaPredicted RBP5.4□□□□□ -1.54
SHP1YBL058W HER1Q12276 1246 aa5.4□□□□□ -1.54
SHP1YBL058W RHO2P06781 192 aa5.39□□□□□ -1.55
SHP1YBL058W ALG7P07286 448 aa5.39□□□□□ -1.55
SHP1YBL058W RPL20AP0CX23 172 aaKnown RBP5.39□□□□□ -1.55
SHP1YBL058W RPL20BP0CX24 172 aaPredicted RBP5.39□□□□□ -1.55
SHP1YBL058W HSC82P15108 705 aaKnown RBP5.39□□□□□ -1.55
SHP1YBL058W SRV2P17555 526 aaKnown RBP5.39□□□□□ -1.55
SHP1YBL058W OCA4P25366 362 aa5.39□□□□□ -1.55
SHP1YBL058W YSC84P32793 468 aa5.39□□□□□ -1.55
SHP1YBL058W EMP70P32802 667 aa5.39□□□□□ -1.55
SHP1YBL058W SPO23P33757 523 aa5.39□□□□□ -1.55
SHP1YBL058W BET3P36149 193 aa5.39□□□□□ -1.55
SHP1YBL058W ATG14P38270 344 aa5.39□□□□□ -1.55
SHP1YBL058W PZF1P39933 429 aa5.39□□□□□ -1.55
SHP1YBL058W TOK1P40310 691 aa5.39□□□□□ -1.55
SHP1YBL058W MET18P40469 1032 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms