RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 NOP56O00567 594 aaKnown RBP12.76□□□□□ -0.37
DDX41-218ENST00000625286 ENPP3O14638 875 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 FIBPO43427 364 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 CAND2O75155 1236 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 ITGB5P18084 799 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
DDX41-218ENST00000625286 MGAT3Q09327 533 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 NEDD9Q14511 834 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 LPIN1Q14693 890 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 WTAPQ15007 396 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 MARCH8Q5T0T0 291 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 RTN4RL1Q86UN2 441 aaPredicted RBP12.76□□□□□ -0.37
DDX41-218ENST00000625286 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
DDX41-218ENST00000625286 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
DDX41-218ENST00000625286 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
DDX41-218ENST00000625286 GRM6O15303 877 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 STAM2O75886 525 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 GHRP10912 638 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 KCNA2P16389 499 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDX41-218ENST00000625286 CAMK1Q14012 370 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 RALGAPA2Q2PPJ7 1873 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 CMTR1Q8N1G2 835 aaKnown RBP12.75□□□□□ -0.37
DDX41-218ENST00000625286 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
DDX41-218ENST00000625286 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
DDX41-218ENST00000625286 SAMD11Q96NU1 681 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
DDX41-218ENST00000625286 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
DDX41-218ENST00000625286 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 hCG_1642624A0A1W2PR95 340 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 PIK3CDO00329 1044 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 SGSM2O43147 1006 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
DDX41-218ENST00000625286 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
DDX41-218ENST00000625286 BMPR1AP36894 532 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 TRDNQ13061 729 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 PTPROQ16827 1216 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 NCOA7Q8NI08 942 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 LINC01599Q8WXQ3 324 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 MAP4K1Q92918 833 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
DDX41-218ENST00000625286 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 PCYT2Q99447 389 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 SPZ1Q9BXG8 430 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 AGO3Q9H9G7 860 aaKnown RBP12.74□□□□□ -0.37
DDX41-218ENST00000625286 HCN4Q9Y3Q4 1203 aa12.74□□□□□ -0.37
DDX41-218ENST00000625286 NRCAMQ92823 1304 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
DDX41-218ENST00000625286 PRR33A8MZF0 331 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 GNAT1P11488 350 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 DNAJB1P25685 340 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 ZP2Q05996 745 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 HYAL1Q12794 435 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 TRAF1Q13077 416 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 TIGD5Q53EQ6 642 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 DNAJB3Q8WWF6 145 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 APBB2Q92870 758 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
DDX41-218ENST00000625286 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
DDX41-218ENST00000625286 ZNF318Q5VUA4 2279 aa12.73□□□□□ -0.37
DDX41-218ENST00000625286 TECTAO75443 2155 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 ERICH2A1L162 156 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 LINC01565O15544 149 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 RXRAP19793 462 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 MARK3P27448 753 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 CTNNB1P35222 781 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 GRIK4Q16099 956 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 UBE2SQ16763 222 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 FBXO47Q5MNV8 452 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 XRRA1Q6P2D8 792 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 RAB11FIP4Q86YS3 637 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
DDX41-218ENST00000625286 MAP3K14Q99558 947 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 ZNF215Q9UL58 517 aaPredicted RBP12.72□□□□□ -0.37
DDX41-218ENST00000625286 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
DDX41-218ENST00000625286 DGKIO75912 1065 aa12.71□□□□□ -0.37
DDX41-218ENST00000625286 IRS1P35568 1242 aa12.71□□□□□ -0.37
DDX41-218ENST00000625286 PPFIA1Q13136 1202 aa12.71□□□□□ -0.37
DDX41-218ENST00000625286 CLUL1Q15846 466 aa12.71□□□□□ -0.37
DDX41-218ENST00000625286 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
DDX41-218ENST00000625286 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.37
DDX41-218ENST00000625286 CYP2W1Q8TAV3 490 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms