RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 ZNF200P98182 395 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 HHIPL2Q6UWX4 724 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 B4GALNT4Q76KP1 1039 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 VCXQ9H320 206 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 ZNF148Q9UQR1 794 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 RABGAP1Q9Y3P9 1069 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 BUB1BO60566 1050 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 CCT6AP40227 531 aaKnown RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 CCNA1P78396 465 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 TPD52L1Q16890 204 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 TCEAL5Q5H9L2 206 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 CCDC158Q5M9N0 1113 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 RSPH3Q86UC2 560 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
EBF1-211ENST00000622875 PHF7Q9BWX1 381 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 IFFO1Q0D2I5 559 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 CCDC184Q52MB2 194 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 PEX5LQ8IYB4 626 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 XAGE3Q8WTP9 111 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ATP6V1E2Q96A05 226 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 LMAN2LQ9H0V9 348 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 PARVBQ9HBI1 364 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 MAST3O60307 1309 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 RAD50Q92878 1312 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ZZEF1O43149 2961 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 TK2O00142 265 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 TBC1D12O60347 775 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ARPC4P59998 168 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 EVX2Q03828 476 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 BICD2Q8TD16 824 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 KCNV2Q8TDN2 545 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 UBXN4Q92575 508 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 N4BP2L2Q92802 583 aaPredicted RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 ZBTB9Q96C00 473 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 RTP3Q9BQQ7 232 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 VPS13AQ96RL7 3174 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 PFDN1O60925 122 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
EBF1-211ENST00000622875 ZFYP08048 801 aaPredicted RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 RPSAP08865 295 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 HNRNPH2P55795 449 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 TUBA4AP68366 448 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 MUM1Q2TAK8 710 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 SP7Q8TDD2 431 aaPredicted RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 PIBF1Q8WXW3 757 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ITM2BQ9Y287 266 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 PARP14Q460N5 1801 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 LINC01553A4QN01 128 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 HSPA4P34932 840 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 CUL3Q13618 768 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 KRTAP21-3Q3LHN1 58 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ABRAQ8N0Z2 381 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 DCLK2Q8N568 766 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ATP11CQ8NB49 1132 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 CABS1Q96KC9 395 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.28□□□□□ -1.4
EBF1-211ENST00000622875 OSBPL5Q9H0X9 879 aaPredicted RBP6.28□□□□□ -1.4
EBF1-211ENST00000622875 MTUS1Q9ULD2 1270 aa6.28□□□□□ -1.4
EBF1-211ENST00000622875 ITPR1Q14643 2758 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 SPTLC1O15269 473 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 ARHGAP6O43182 974 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 GMNNO75496 209 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 PLA2G2AP14555 144 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 MFSD14BQ5SR56 506 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 SMRP1Q8NCR6 262 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 ASPMQ8IZT6 3477 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 ZBBXA8MT70 800 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 STRNO43815 780 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 CTSWP56202 376 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 LARP1BQ659C4 914 aaKnown RBP6.27□□□□□ -1.41
EBF1-211ENST00000622875 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
EBF1-211ENST00000622875 THUMPD2Q9BTF0 503 aaKnown RBP6.27□□□□□ -1.41
EBF1-211ENST00000622875 SEL1LQ9UBV2 794 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 HOOK1Q9UJC3 728 aaKnown RBP6.27□□□□□ -1.41
EBF1-211ENST00000622875 WASF3Q9UPY6 502 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 CARD8Q9Y2G2 431 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 SIPA1L1O43166 1804 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 NDC80O14777 642 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 LRP3O75074 770 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 U2AF2P26368 475 aaKnown RBP eCLIP6.27□□□□□ -1.41
EBF1-211ENST00000622875 MATR3P43243 847 aaKnown RBP eCLIP6.27□□□□□ -1.41
EBF1-211ENST00000622875 CCR10P46092 362 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 E2F5Q15329 346 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 CPLX2Q6PUV4 134 aaKnown RBP6.27□□□□□ -1.41
EBF1-211ENST00000622875 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 PDZD3Q86UT5 571 aa6.27□□□□□ -1.41
EBF1-211ENST00000622875 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms