RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 KIAA1671Q9BY89 1806 aa19.34■□□□□ 0.69
TARDBP-225ENST00000621715 TTC3P53804 2025 aa19.34■□□□□ 0.69
TARDBP-225ENST00000621715 LOXHD1Q8IVV2 1947 aa19.33■□□□□ 0.69
TARDBP-225ENST00000621715 FIBPO43427 364 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 CAND2O75155 1236 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 GHRP10912 638 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 SSTR3P32745 418 aaPredicted RBP19.33■□□□□ 0.68
TARDBP-225ENST00000621715 DLX2Q07687 328 aaPredicted RBP19.33■□□□□ 0.68
TARDBP-225ENST00000621715 MGAT3Q09327 533 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 NEDD9Q14511 834 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 WTAPQ15007 396 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 GNPTABQ3T906 1256 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 EHMT1Q9H9B1 1298 aa19.33■□□□□ 0.68
TARDBP-225ENST00000621715 POTEB3A0JP26 581 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 GRM6O15303 877 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 CHMLP26374 656 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 GTF2F1P35269 517 aaKnown RBP eCLIP19.32■□□□□ 0.681e-25■■■□□ 17.1
TARDBP-225ENST00000621715 LPIN1Q14693 890 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 PTPROQ16827 1216 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 TIGD5Q53EQ6 642 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 PCNX4Q63HM2 1172 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 POTEBQ6S5H4 581 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 MB21D2Q8IYB1 491 aaPredicted RBP19.32■□□□□ 0.68
TARDBP-225ENST00000621715 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
TARDBP-225ENST00000621715 PABPC5Q96DU9 382 aaKnown RBP19.32■□□□□ 0.68
TARDBP-225ENST00000621715 SAMD11Q96NU1 681 aa19.32■□□□□ 0.68
TARDBP-225ENST00000621715 GSTTP1A0A1W2PQM5 241 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 STAM2O75886 525 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 KCNA2P16389 499 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 ITGB5P18084 799 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 ZP2Q05996 745 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 TRDNQ13061 729 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 MARCH8Q5T0T0 291 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 LINC01599Q8WXQ3 324 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 NSUN3Q9H649 340 aaKnown RBP19.31■□□□□ 0.68
TARDBP-225ENST00000621715 LY9Q9HBG7 655 aa19.31■□□□□ 0.68
TARDBP-225ENST00000621715 U3KPZ7 1027 aaPredicted RBP19.31■□□□□ 0.68
TARDBP-225ENST00000621715 ZNF318Q5VUA4 2279 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 PRR33A8MZF0 331 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 CSPG5O95196 566 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 MARK3P27448 753 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 CTNNB1P35222 781 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 TCF7P36402 384 aaPredicted RBP19.3■□□□□ 0.68
TARDBP-225ENST00000621715 HYAL1Q12794 435 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 CAMK1Q14012 370 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 CTC1Q2NKJ3 1217 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 EP400NLQ6ZTU2 488 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 IL17RAQ96F46 866 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 SENP7Q9BQF6 1050 aa19.3■□□□□ 0.68
TARDBP-225ENST00000621715 AGO3Q9H9G7 860 aaKnown RBP19.3■□□□□ 0.68
TARDBP-225ENST00000621715 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 C5orf67F2Z3F1 127 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 ENPP3O14638 875 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 GNAT1P11488 350 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 RXRAP19793 462 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 CLUL1Q15846 466 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 RPAINQ86UA6 219 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 SRBD1Q8N5C6 995 aaKnown RBP19.29■□□□□ 0.68
TARDBP-225ENST00000621715 NCOA7Q8NI08 942 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 SMARCC2Q8TAQ2 1214 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 APBB2Q92870 758 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 SPZ1Q9BXG8 430 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 CLDND1Q9NY35 253 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 PKD2L1Q9P0L9 805 aa19.29■□□□□ 0.68
TARDBP-225ENST00000621715 ZNF215Q9UL58 517 aaPredicted RBP19.29■□□□□ 0.68
TARDBP-225ENST00000621715 ADGRA3Q8IWK6 1321 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 NRCAMQ92823 1304 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 ERICH2A1L162 156 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 C19orf67A6NJJ6 358 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 LINC01565O15544 149 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 SGSM2O43147 1006 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 BMPR1AP36894 532 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 TRAF1Q13077 416 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 UBE2SQ16763 222 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 RALYLQ86SE5 291 aaKnown RBP19.28■□□□□ 0.68
TARDBP-225ENST00000621715 RTN4RL1Q86UN2 441 aaPredicted RBP19.28■□□□□ 0.68
TARDBP-225ENST00000621715 RAB11FIP4Q86YS3 637 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 FIBCD1Q8N539 461 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 DNAJB3Q8WWF6 145 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 ZNF689Q96CS4 500 aaPredicted RBP19.28■□□□□ 0.68
TARDBP-225ENST00000621715 PCYT2Q99447 389 aa19.28■□□□□ 0.68
TARDBP-225ENST00000621715 MBLAC1A4D2B0 266 aaPredicted RBP19.27■□□□□ 0.68
TARDBP-225ENST00000621715 TBX10O75333 385 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 DNAJB1P25685 340 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 PPFIA1Q13136 1202 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 GRIK4Q16099 956 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 FBXO47Q5MNV8 452 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 CRIPAKQ8N1N5 446 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 CLP1Q92989 425 aaKnown RBP19.27■□□□□ 0.68
TARDBP-225ENST00000621715 CDY2AQ9Y6F7 541 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 TECTAO75443 2155 aa19.27■□□□□ 0.68
TARDBP-225ENST00000621715 IRS1P35568 1242 aa19.26■□□□□ 0.67
TARDBP-225ENST00000621715 PUS10Q3MIT2 529 aaKnown RBP19.26■□□□□ 0.67
TARDBP-225ENST00000621715 MAP4K1Q92918 833 aa19.26■□□□□ 0.67
TARDBP-225ENST00000621715 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
TARDBP-225ENST00000621715 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms