RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 CNOT8Q9UFF9 292 aaKnown RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 PHF20L1A8MW92 1017 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 PGRMC1O00264 195 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 TRAF5O00463 557 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 DNAJC8O75937 253 aaPredicted RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 NOL4O94818 638 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 GHRP10912 638 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 TXKP42681 527 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 LRRC41Q15345 812 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 IFI16Q16666 785 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 SLC4A8Q2Y0W8 1093 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 NEK8Q86SG6 692 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 DGKHQ86XP1 1220 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 SCFD2Q8WU76 684 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CALR3Q96L12 384 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CNOT10Q9H9A5 744 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 ATP8A2Q9NTI2 1148 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 A0A1B0GUL6 1792 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 OPLAHO14841 1288 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 USP11P51784 963 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 BYSLQ13895 437 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 ACTRT1Q8TDG2 376 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CCT6BQ92526 530 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 DDX47Q9H0S4 455 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 NEUROG2Q9H2A3 272 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 BLOC1S4Q9NUP1 217 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 COL1A1P02452 1464 aaPredicted RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 A0A0G2JS52 829 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CCDC188H7C350 402 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 KRIT1O00522 736 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 MGRN1O60291 552 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 IL6STP40189 918 aaPredicted RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 EPS15P42566 896 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 FKBP3Q00688 224 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 GRB10Q13322 594 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 MYOCDQ8IZQ8 938 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 ANKS4BQ8N8V4 417 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CCDC197Q8NCU1 140 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 ZNF384Q8TF68 577 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 CHMP6Q96FZ7 201 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 C6orf50Q9HD87 102 aa9.51□□□□□ -0.89
C9orf72-206ENST00000619707 NOC2LQ9Y3T9 749 aaKnown RBP9.51□□□□□ -0.89
C9orf72-206ENST00000619707 SHANK3Q9BYB0 1731 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 COL5A2P05997 1499 aaPredicted RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 DAPK3O43293 454 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 DRD4P21917 467 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 HOXA7P31268 230 aaPredicted RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 PSMD2Q13200 908 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 PPP1R7Q15435 360 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 CCDC26Q8TAB7 109 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 LRRC27Q9C0I9 530 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 MCM9Q9NXL9 1143 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 BAIAP2L1Q9UHR4 511 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 FRMD3A2A2Y4 597 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 DCDC2CA8MYV0 355 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 CYTH3O43739 400 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 TRIM37O94972 964 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 GNA11P29992 359 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 FLT3P36888 993 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 MAP2K1Q02750 393 aaPredicted RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 NAA25Q14CX7 972 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 PTPROQ16827 1216 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 TMEM266Q2M3C6 531 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 SBK1Q52WX2 424 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 C10orf76Q5T2E6 689 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 HIBCHQ6NVY1 386 aaPredicted RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 TMC3Q7Z5M5 1100 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 FMNL3Q8IVF7 1028 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 RSRC1Q96IZ7 334 aaKnown RBP9.5□□□□□ -0.89
C9orf72-206ENST00000619707 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 GOLPH3Q9H4A6 298 aa9.5□□□□□ -0.89
C9orf72-206ENST00000619707 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
C9orf72-206ENST00000619707 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 CCT8L1PA6NM43 557 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 BTNL10A8MVZ5 291 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 BUB1BO60566 1050 aaPredicted RBP9.49□□□□□ -0.89
C9orf72-206ENST00000619707 CTNND1O60716 968 aaKnown RBP9.49□□□□□ -0.89
C9orf72-206ENST00000619707 NEBLO76041 1014 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 ATP6V1G2O95670 118 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
C9orf72-206ENST00000619707 EVA1CP58658 441 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 ELF3P78545 371 aaPredicted RBP9.49□□□□□ -0.89
C9orf72-206ENST00000619707 MECOMQ03112 1051 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 SOGA3Q5TF21 947 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 TBCKQ8TEA7 893 aa9.49□□□□□ -0.89
C9orf72-206ENST00000619707 DDX12PQ92771 950 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms