RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 NECTIN1Q15223 517 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 LMBR1Q8WVP7 490 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 HLA-CQ95604 372 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 PSTPIP2Q9H939 334 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 KCNA2P16389 499 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 HTRA4P83105 476 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 UBE2SQ16763 222 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 GIMAP8Q8ND71 665 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 SEPT8Q92599 483 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 GPRASP2Q96D09 838 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 C17orf80Q9BSJ5 609 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 SLC12A7Q9Y666 1083 aa23.88■■□□□ 1.41
TRAPPC3-208ENST00000616074 BRWD1Q9NSI6 2320 aa23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 ITGB5P18084 799 aa23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 TCF7P36402 384 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 TMTC3Q6ZXV5 915 aa23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 SP7Q8TDD2 431 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 ANO2Q9NQ90 1003 aa23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 NLRC5Q86WI3 1866 aa23.87■■□□□ 1.41
TRAPPC3-208ENST00000616074 CDHR1Q96JP9 859 aa23.86■■□□□ 1.41
TRAPPC3-208ENST00000616074 NRCAMQ92823 1304 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 COL9A1P20849 921 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 FAM26DQ5JW98 314 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 SGMS1Q86VZ5 419 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 MICU3Q86XE3 530 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 FANCBQ8NB91 859 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 FBXO22Q8NEZ5 403 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 TOP1MTQ969P6 601 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 PKD2L1Q9P0L9 805 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 UBIAD1Q9Y5Z9 338 aa23.85■■□□□ 1.41
TRAPPC3-208ENST00000616074 COL4A6Q14031 1691 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 GSTTP1A0A1W2PQM5 241 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 SPDYE3A6NKU9 549 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 UPP2O95045 317 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 MTMR1Q13613 665 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 RUFY4Q6ZNE9 571 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 HEATR3Q7Z4Q2 680 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 PCDHA6Q9UN73 950 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 PCDHA8Q9Y5H6 950 aa23.84■■□□□ 1.41
TRAPPC3-208ENST00000616074 MARK3P27448 753 aa23.83■■□□□ 1.41
TRAPPC3-208ENST00000616074 SEPT1Q8WYJ6 367 aa23.83■■□□□ 1.41
TRAPPC3-208ENST00000616074 APBB2Q92870 758 aa23.83■■□□□ 1.41
TRAPPC3-208ENST00000616074 YME1L1Q96TA2 773 aa23.83■■□□□ 1.41
TRAPPC3-208ENST00000616074 IFIH1Q9BYX4 1025 aaKnown RBP23.83■■□□□ 1.41
TRAPPC3-208ENST00000616074 RALGAPA2Q2PPJ7 1873 aa23.83■■□□□ 1.4
TRAPPC3-208ENST00000616074 CNTNAP5Q8WYK1 1306 aa23.83■■□□□ 1.4
TRAPPC3-208ENST00000616074 CHRNA1P02708 482 aa23.82■■□□□ 1.4
TRAPPC3-208ENST00000616074 PPFIA1Q13136 1202 aa23.82■■□□□ 1.4
TRAPPC3-208ENST00000616074 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
TRAPPC3-208ENST00000616074 JADE2Q9NQC1 790 aa23.82■■□□□ 1.4
TRAPPC3-208ENST00000616074 ERAP1Q9NZ08 941 aa23.82■■□□□ 1.4
TRAPPC3-208ENST00000616074 MGAT3Q09327 533 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 GRIK4Q16099 956 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 EPC2Q52LR7 807 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 WWC2Q6AWC2 1192 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 TAF2Q6P1X5 1199 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 RPAINQ86UA6 219 aa23.81■■□□□ 1.4
TRAPPC3-208ENST00000616074 GHRP10912 638 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 TYW1BQ6NUM6 668 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 APOA5Q6Q788 366 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 SYNE3Q6ZMZ3 975 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 GLG1Q92896 1179 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 TCEANC2Q96MN5 208 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 SAMD11Q96NU1 681 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 UBE2ZQ9H832 354 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 RAPGEFL1Q9UHV5 662 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 TUBE1Q9UJT0 475 aa23.8■■□□□ 1.4
TRAPPC3-208ENST00000616074 MAFGO15525 162 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 BMP2KLQ5H9B9 411 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 MARCH8Q5T0T0 291 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 RNF20Q5VTR2 975 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 NEK1Q96PY6 1258 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 SMARCAD1Q9H4L7 1026 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 EHMT1Q9H9B1 1298 aa23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 JPH1Q9HDC5 661 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 RBM28Q9NW13 759 aaKnown RBP23.79■■□□□ 1.4
TRAPPC3-208ENST00000616074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 MBLAC1A4D2B0 266 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 LPIN1Q14693 890 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 CYP2W1Q8TAV3 490 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 DNAJB3Q8WWF6 145 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 MRPL38Q96DV4 380 aaKnown RBP23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 PGBD1Q96JS3 809 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 PCYT2Q99447 389 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 MXRA8Q9BRK3 442 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 KCNH7Q9NS40 1196 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 BRPF3Q9ULD4 1205 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 ATG2AQ2TAZ0 1938 aa23.78■■□□□ 1.4
TRAPPC3-208ENST00000616074 H3BNC9 293 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 NAPAP54920 295 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 IGBP1P78318 339 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 EXOSC10Q01780 885 aaKnown RBP23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 FUT2Q10981 343 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 GPM6BQ13491 265 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 RSPH3Q86UC2 560 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 TMEM192Q8IY95 271 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 ZBTB10Q96DT7 871 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 RIC8AQ9NPQ8 531 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms