RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 NUDT12Q9BQG2 462 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 PDCD2LQ9BRP1 358 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 EFCC1Q9HA90 598 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 GRPEL1Q9HAV7 217 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 DISC1Q9NRI5 854 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 CPA4Q9UI42 421 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 VAV3Q9UKW4 847 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 PCDHA12Q9UN75 941 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 PTPN22Q9Y2R2 807 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 CENPFP49454 3210 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 MYH11P35749 1972 aa9.1□□□□□ -0.95
TARDBP-213ENST00000611963 DPYSL4O14531 572 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 TBX3O15119 743 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 SLC25A27O95847 323 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 CCND2P30279 289 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
TARDBP-213ENST00000611963 CCT6AP40227 531 aaKnown RBP9.09□□□□□ -0.95
TARDBP-213ENST00000611963 LACTBP83111 547 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-213ENST00000611963 SETQ01105 290 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-213ENST00000611963 SPIRE1Q08AE8 756 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 GRB10Q13322 594 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 PDIA5Q14554 519 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 ECM1Q16610 540 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 STX1AQ16623 288 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 TMEM119Q4V9L6 283 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 WDR78Q5VTH9 848 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 LRCH2Q5VUJ6 765 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 KRT79Q5XKE5 535 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 C11orf57Q6ZUT1 292 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-213ENST00000611963 SLC5A5Q92911 643 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 MTRQ99707 1265 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 RAB34Q9BZG1 259 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 WDR11Q9BZH6 1224 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 DNAJC25Q9H1X3 360 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 PORCNQ9H237 461 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 CCDC39Q9UFE4 941 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 FBXO40Q9UH90 709 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 USP25Q9UHP3 1055 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 SLC45A1Q9Y2W3 748 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 UBIAD1Q9Y5Z9 338 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 LOXHD1Q8IVV2 1947 aa9.09□□□□□ -0.95
TARDBP-213ENST00000611963 ASTN1O14525 1302 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 PFASO15067 1338 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 DDX39AO00148 427 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 EML1O00423 815 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 CHMP2AO43633 222 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 GAS7O60861 476 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 PSMD10O75832 226 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 NR3C2P08235 984 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 BCRP11274 1271 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 KANK3Q6NY19 840 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 KCNK18Q7Z418 384 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 ELOA2Q8IYF1 753 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 PARK7Q99497 189 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 MMP19Q99542 508 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 PYM1Q9BRP8 204 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 BLZF1Q9H2G9 400 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 AGO4Q9HCK5 861 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 JADE2Q9NQC1 790 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 BLOC1S4Q9NUP1 217 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 ANO10Q9NW15 660 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
TARDBP-213ENST00000611963 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 MAN1B1Q9UKM7 699 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 PTCH2Q9Y6C5 1203 aa9.08□□□□□ -0.96
TARDBP-213ENST00000611963 BRCA2P51587 3418 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 SOWAHBA6NEL2 793 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 IPO5O00410 1097 aaKnown RBP9.07□□□□□ -0.96
TARDBP-213ENST00000611963 EVI5O60447 810 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 MED24O75448 989 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 PGK2P07205 417 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 COPB2P35606 906 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 MRE11P49959 708 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-213ENST00000611963 NLRP12P59046 1061 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 DPYDQ12882 1025 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 ITGB3BPQ13352 177 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-213ENST00000611963 MTMR1Q13613 665 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 CUL4BQ13620 913 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
TARDBP-213ENST00000611963 MCM6Q14566 821 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 DPCR1Q3MIW9 517 aa9.07□□□□□ -0.96
TARDBP-213ENST00000611963 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
TARDBP-213ENST00000611963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms