RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 USP11P51784 963 aa29.56■■■□□ 2.32
VEGFA-226ENST00000611736 KRT25Q7Z3Z0 450 aa29.56■■■□□ 2.32
VEGFA-226ENST00000611736 OXER1Q8TDS5 423 aa29.56■■■□□ 2.32
VEGFA-226ENST00000611736 ZNF577Q9BSK1 485 aa29.56■■■□□ 2.32
VEGFA-226ENST00000611736 ZNF215Q9UL58 517 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-226ENST00000611736 IPO5O00410 1097 aaKnown RBP29.55■■■□□ 2.32
VEGFA-226ENST00000611736 EPHB4P54760 987 aa29.55■■■□□ 2.32
VEGFA-226ENST00000611736 CCL23P55773 120 aa29.55■■■□□ 2.32
VEGFA-226ENST00000611736 NONOQ15233 471 aaKnown RBP eCLIP29.55■■■□□ 2.323e-6■■■□□ 16.3
VEGFA-226ENST00000611736 TMEM199Q8N511 208 aa29.55■■■□□ 2.32
VEGFA-226ENST00000611736 LLPHQ9BRT6 129 aaKnown RBP29.55■■■□□ 2.32
VEGFA-226ENST00000611736 CCDC194A0A1B0GVG4 234 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 SMIM10L2AP0DMW4 78 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 SMIM10L2BP0DMW5 78 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 CSF2RAP15509 400 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 ACTR2P61160 394 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 ZNF200P98182 395 aaPredicted RBP29.54■■■□□ 2.32
VEGFA-226ENST00000611736 INF2Q27J81 1249 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 LENG9Q96B70 501 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 CTAGE1Q96RT6 745 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 WNT8AQ9H1J5 351 aa29.54■■■□□ 2.32
VEGFA-226ENST00000611736 KRT2P35908 639 aa29.53■■■□□ 2.32
VEGFA-226ENST00000611736 C9orf50Q5SZB4 431 aa29.53■■■□□ 2.32
VEGFA-226ENST00000611736 GLG1Q92896 1179 aa29.53■■■□□ 2.32
VEGFA-226ENST00000611736 KAT6AQ92794 2004 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 DHX15O43143 795 aaKnown RBP29.52■■■□□ 2.32
VEGFA-226ENST00000611736 CD2BP2O95400 341 aaKnown RBP29.52■■■□□ 2.32
VEGFA-226ENST00000611736 TDP2O95551 362 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 MARK3P27448 753 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 PPIGQ13427 754 aaKnown RBP eCLIP29.52■■■□□ 2.321e-7■■□□□ 12.5
VEGFA-226ENST00000611736 TRIM29Q14134 588 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 HIC1Q14526 733 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 SHHQ15465 462 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 BRMS1Q9HCU9 246 aa29.52■■■□□ 2.32
VEGFA-226ENST00000611736 C17orf102A2RUQ5 167 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 CCNE2O96020 404 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 NR5A1Q13285 461 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 PIK3AP1Q6ZUJ8 805 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 SCLYQ96I15 445 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 SMARCAD1Q9H4L7 1026 aa29.51■■■□□ 2.31
VEGFA-226ENST00000611736 LGR5O75473 907 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 ACRP10323 421 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 BFSP2Q13515 415 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 KRT40Q6A162 431 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 DHX38Q92620 1227 aaKnown RBP29.5■■■□□ 2.31
VEGFA-226ENST00000611736 PCYT2Q99447 389 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 RNPEPQ9H4A4 650 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 AZI2Q9H6S1 392 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 TBC1D22BQ9NU19 505 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 ERAP1Q9NZ08 941 aa29.5■■■□□ 2.31
VEGFA-226ENST00000611736 EMSYQ7Z589 1322 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 MSH4O15457 936 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 MMP1P03956 469 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 GUCY1B3Q02153 619 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 LETM2Q2VYF4 491 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 RETREG2Q8NC44 543 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 ATP6V0A1Q93050 837 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 SETD4Q9NVD3 440 aa29.49■■■□□ 2.31
VEGFA-226ENST00000611736 SZT2Q5T011 3432 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 CYP3A7-CYP3A51PA0A087WV96 503 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 FAM205CA6NFA0 338 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 PITPNM1O00562 1244 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 CYP3A7P24462 503 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 HMGN5P82970 282 aaKnown RBP29.48■■■□□ 2.31
VEGFA-226ENST00000611736 Q4G0T1 1027 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 EARS2Q5JPH6 523 aaKnown RBP29.48■■■□□ 2.31
VEGFA-226ENST00000611736 NEK8Q86SG6 692 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 CCDC155Q8N6L0 562 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 IL27Q8NEV9 243 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 GJA10Q969M2 543 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 TCEAL9Q9UHQ7 104 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 SCN5AQ14524 2016 aa29.48■■■□□ 2.31
VEGFA-226ENST00000611736 HOXC8P31273 242 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 PTK7Q13308 1070 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 MOXD1Q6UVY6 613 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 C16orf59Q7L2K0 433 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 DIS3L2Q8IYB7 885 aaKnown RBP29.47■■■□□ 2.31
VEGFA-226ENST00000611736 FAM184AQ8NB25 1140 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 CAGE1Q8TC20 777 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 TNFRSF25Q93038 417 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 WNT8BQ93098 351 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 TMX3Q96JJ7 454 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 C8orf76Q96K31 380 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 IL23AQ9NPF7 189 aa29.47■■■□□ 2.31
VEGFA-226ENST00000611736 BTBD18B2RXH4 712 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 BACH1O14867 736 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 TREHO43280 583 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 ATG7O95352 703 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 PPFIA1Q13136 1202 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 ZNF746Q6NUN9 644 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-226ENST00000611736 ABHD15Q6UXT9 468 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 RNPC3Q96LT9 517 aaKnown RBP29.46■■■□□ 2.31
VEGFA-226ENST00000611736 MBOAT7Q96N66 472 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.46■■■□□ 2.311e-12■■■□□ 14.7
VEGFA-226ENST00000611736 DDX25Q9UHL0 483 aaKnown RBP29.46■■■□□ 2.31
VEGFA-226ENST00000611736 TANC1Q9C0D5 1861 aa29.46■■■□□ 2.31
VEGFA-226ENST00000611736 SOX1O00570 391 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-226ENST00000611736 GAS7O60861 476 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 GNAT1P11488 350 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 STAT5BP51692 787 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms