RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GNAT1P11488 350 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 DNAJB1P25685 340 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 NRIP1P48552 1158 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ARHGAP4P98171 946 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GHRHRQ02643 423 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 COASYQ13057 564 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PGM5Q15124 567 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 FAM26DQ5JW98 314 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ZNF589Q86UQ0 364 aaPredicted RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PLVAPQ9BX97 442 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PTPRZ1P23471 2315 aaPredicted RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GVINP1Q7Z2Y8 2422 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CHRNA1P02708 482 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TGFB3P10600 412 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CCND2P30279 289 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 LPIN1Q14693 890 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ZNF689Q96CS4 500 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 AMNQ9BXJ7 453 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TRIP12Q14669 1992 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1P1-201ENST00000604187 H0Y858 1186 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ENPP3O14638 875 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 DGKIO75912 1065 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GLP2RO95838 553 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ITGB1P05556 798 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PARP1P09874 1014 aaKnown RBP13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 AVPR2P30518 371 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 P2RX5Q93086 422 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GPR20Q99678 358 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 IRF2BPLQ9H1B7 796 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TLR9Q9NR96 1032 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MICAL3Q7RTP6 2002 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 KDM4AO75164 1064 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ADAM17P78536 824 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PTPN21Q16825 1174 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 IQCA1Q86XH1 822 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 KLHL23Q8NBE8 558 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 SPPL3Q8TCT6 385 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TELO2Q9Y4R8 837 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 DMDP11532 3685 aa13.66□□□□□ -0.22
PDLIM1P1-201ENST00000604187 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ICAM3P32942 547 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 SP4Q02446 784 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MGAT3Q09327 533 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GNPTABQ3T906 1256 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PAN2Q504Q3 1202 aaKnown RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 NAALADL2Q58DX5 795 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CYFIP1Q7L576 1253 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ASCL5Q7RTU5 278 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 LINC01599Q8WXQ3 324 aa13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ZSCAN10Q96SZ4 725 aaPredicted RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MAP3K20Q9NYL2 800 aaKnown RBP13.65□□□□□ -0.22
PDLIM1P1-201ENST00000604187 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZBTB5O15062 677 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NEDD9Q14511 834 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZBTB33Q86T24 672 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 STAG2Q8N3U4 1231 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TLE6Q9H808 572 aa13.64□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 B4E1Z4 1266 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 KLRF2D3W0D1 207 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms