RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 MYO7AQ13402 2215 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 H3BQ06 376 aaPredicted RBP15.76■□□□□ 0.11
IRF3-225ENST00000600022 ST18O60284 1047 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 CHRNA1P02708 482 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 WTAPQ15007 396 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 LEXMQ3ZCV2 418 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 TMEM31Q5JXX7 168 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 RNF20Q5VTR2 975 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 CREB3L3Q68CJ9 461 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 RUFY4Q6ZNE9 571 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 FAM178BQ8IXR5 827 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 SAMD3Q8N6K7 520 aa15.76■□□□□ 0.11
IRF3-225ENST00000600022 SIP14410 1827 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 FRMPD4Q14CM0 1322 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 PI4K2BG5E9Z4 385 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 NOP56O00567 594 aaKnown RBP15.75■□□□□ 0.11
IRF3-225ENST00000600022 MEIS2O14770 477 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 SLC27A2O14975 620 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 TRDNQ13061 729 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 GPM6BQ13491 265 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 METTL7BQ6UX53 244 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 TMEM192Q8IY95 271 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 LMBR1Q8WVP7 490 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 SEPT8Q92599 483 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
IRF3-225ENST00000600022 MICAL3Q7RTP6 2002 aa15.75■□□□□ 0.11
IRF3-225ENST00000600022 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 GRXCR2A6NFK2 248 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 H3BNC9 293 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 GPR37L1O60883 481 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 LINC00271P0C7V0 271 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 ARHGAP4P98171 946 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 TSGA10IPQ3SY00 556 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 TCEAL5Q5H9L2 206 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 PTCRAQ6ISU1 281 aaPredicted RBP15.74■□□□□ 0.11
IRF3-225ENST00000600022 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
IRF3-225ENST00000600022 RASEFQ8IZ41 740 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 GJD3Q8N144 294 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 YME1L1Q96TA2 773 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 SNX14Q9Y5W7 946 aa15.74■□□□□ 0.11
IRF3-225ENST00000600022 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 FIBPO43427 364 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 RXRAP19793 462 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 NEDD9Q14511 834 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 FAM26DQ5JW98 314 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
IRF3-225ENST00000600022 BANK1Q8NDB2 785 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 SNX21Q969T3 373 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 IFIH1Q9BYX4 1025 aaKnown RBP15.73■□□□□ 0.11
IRF3-225ENST00000600022 LY9Q9HBG7 655 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
IRF3-225ENST00000600022 ERICH2A1L162 156 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 GHRP10912 638 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 ITGB5P18084 799 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 LTBRP36941 435 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 GNPTABQ3T906 1256 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 MARCH8Q5T0T0 291 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 EP400NLQ6ZTU2 488 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 CATIPQ7Z7H3 387 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 RALYLQ86SE5 291 aaKnown RBP15.72■□□□□ 0.11
IRF3-225ENST00000600022 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
IRF3-225ENST00000600022 ENPP3O14638 875 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 GRM6O15303 877 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 CSPG5O95196 566 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 KCNA2P16389 499 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 MARK3P27448 753 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
IRF3-225ENST00000600022 GTF2F1P35269 517 aaKnown RBP eCLIP15.71■□□□□ 0.114e-10■■■■■ 32.8
IRF3-225ENST00000600022 TCF7P36402 384 aaPredicted RBP15.71■□□□□ 0.11
IRF3-225ENST00000600022 MCM2P49736 904 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 DLX2Q07687 328 aaPredicted RBP15.71■□□□□ 0.11
IRF3-225ENST00000600022 MGAT3Q09327 533 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 KRT32Q14532 448 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 LPIN1Q14693 890 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 UBE2SQ16763 222 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 PCNX4Q63HM2 1172 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 TM6SF1Q9BZW5 370 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
IRF3-225ENST00000600022 POTEB3A0JP26 581 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 STAM2O75886 525 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 HSP90AA1P07900 732 aaKnown RBP15.7■□□□□ 0.1
IRF3-225ENST00000600022 SSTR3P32745 418 aaPredicted RBP15.7■□□□□ 0.1
IRF3-225ENST00000600022 POTEBQ6S5H4 581 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 RTN4RL1Q86UN2 441 aaPredicted RBP15.7■□□□□ 0.1
IRF3-225ENST00000600022 CCDC82Q8N4S0 544 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 DNAJB3Q8WWF6 145 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 RRP36Q96EU6 259 aaKnown RBP15.7■□□□□ 0.1
IRF3-225ENST00000600022 SENP7Q9BQF6 1050 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
IRF3-225ENST00000600022 AGO3Q9H9G7 860 aaKnown RBP15.7■□□□□ 0.1
IRF3-225ENST00000600022 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 CAND2O75155 1236 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 GNAT1P11488 350 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 PSMA5P28066 241 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms