RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 CCDC83Q8IWF9 413 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 WASF1Q92558 559 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 VWCEQ96DN2 955 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 PCYT2Q99447 389 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 SDF4Q9BRK5 362 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 RNPEPQ9H4A4 650 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 UPF2Q9HAU5 1272 aaKnown RBP25.93■■□□□ 1.74
IRF3-220ENST00000598108 NOD1Q9Y239 953 aa25.93■■□□□ 1.74
IRF3-220ENST00000598108 CCNE2O96020 404 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 SMIM10L2AP0DMW4 78 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 SMIM10L2BP0DMW5 78 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 ACTR2P61160 394 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 LRIT3Q3SXY7 679 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 SCLYQ96I15 445 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 TBC1D32Q96NH3 1257 aa25.92■■□□□ 1.74
IRF3-220ENST00000598108 DDX39AO00148 427 aaKnown RBP25.91■■□□□ 1.74
IRF3-220ENST00000598108 IPO5O00410 1097 aaKnown RBP25.91■■□□□ 1.74
IRF3-220ENST00000598108 XBP1P17861 261 aa25.91■■□□□ 1.74
IRF3-220ENST00000598108 HOXC8P31273 242 aa25.91■■□□□ 1.74
IRF3-220ENST00000598108 PPIGQ13427 754 aaKnown RBP eCLIP25.91■■□□□ 1.743e-8■■■□□ 15.4
IRF3-220ENST00000598108 WNT8BQ93098 351 aa25.91■■□□□ 1.74
IRF3-220ENST00000598108 LRCH3Q96II8 777 aa25.91■■□□□ 1.74
IRF3-220ENST00000598108 ZSCAN31Q96LW9 406 aaPredicted RBP25.91■■□□□ 1.74
IRF3-220ENST00000598108 ZNF577Q9BSK1 485 aa25.91■■□□□ 1.74
IRF3-220ENST00000598108 FOSBP53539 338 aa25.9■■□□□ 1.74
IRF3-220ENST00000598108 TMEM240Q5SV17 173 aa25.9■■□□□ 1.74
IRF3-220ENST00000598108 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.9■■□□□ 1.741e-10■□□□□ 10.9
IRF3-220ENST00000598108 ZNF215Q9UL58 517 aaPredicted RBP25.9■■□□□ 1.74
IRF3-220ENST00000598108 RBAK-RBAKDNI3L0D1 243 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 LGR5O75473 907 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 ATG7O95352 703 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 MARK3P27448 753 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 SETQ01105 290 aaPredicted RBP25.89■■□□□ 1.74
IRF3-220ENST00000598108 NONOQ15233 471 aaKnown RBP eCLIP25.89■■□□□ 1.74
IRF3-220ENST00000598108 EARS2Q5JPH6 523 aaKnown RBP25.89■■□□□ 1.74
IRF3-220ENST00000598108 KRT25Q7Z3Z0 450 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 GLG1Q92896 1179 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 IL23AQ9NPF7 189 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 SETD4Q9NVD3 440 aa25.89■■□□□ 1.74
IRF3-220ENST00000598108 DOCK5Q9H7D0 1870 aa25.89■■□□□ 1.73
IRF3-220ENST00000598108 C17orf102A2RUQ5 167 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 PITPNM1O00562 1244 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 MSH4O15457 936 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 TDP2O95551 362 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 IQCF3P0C7M6 154 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 PTK7Q13308 1070 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 BFSP2Q13515 415 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 INF2Q27J81 1249 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 TRIM71Q2Q1W2 868 aaKnown RBP25.88■■□□□ 1.73
IRF3-220ENST00000598108 ZNF365Q70YC5 407 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 RETREG2Q8NC44 543 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 BACH2Q9BYV9 841 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 SMARCAD1Q9H4L7 1026 aa25.88■■□□□ 1.73
IRF3-220ENST00000598108 SH2B1Q9NRF2 756 aaPredicted RBP25.88■■□□□ 1.73
IRF3-220ENST00000598108 LAMA2P24043 3122 aaKnown RBP25.88■■□□□ 1.73
IRF3-220ENST00000598108 CYP3A7-CYP3A51PA0A087WV96 503 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 TREHO43280 583 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 CD2BP2O95400 341 aaKnown RBP25.87■■□□□ 1.73
IRF3-220ENST00000598108 CYP3A7P24462 503 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 ABHD15Q6UXT9 468 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 ATP6V0A1Q93050 837 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 GJA10Q969M2 543 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 LLPHQ9BRT6 129 aaKnown RBP25.87■■□□□ 1.73
IRF3-220ENST00000598108 ERAP1Q9NZ08 941 aa25.87■■□□□ 1.73
IRF3-220ENST00000598108 SZT2Q5T011 3432 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 ADAM17P78536 824 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 NR5A1Q13285 461 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 GPNMBQ14956 572 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 Q4G0T1 1027 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 PIK3AP1Q6ZUJ8 805 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 SERINC5Q86VE9 423 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 CAGE1Q8TC20 777 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 TNFRSF25Q93038 417 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 RNPC3Q96LT9 517 aaKnown RBP25.86■■□□□ 1.73
IRF3-220ENST00000598108 MBOAT7Q96N66 472 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 TBC1D22BQ9NU19 505 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 EMSYQ7Z589 1322 aa25.86■■□□□ 1.73
IRF3-220ENST00000598108 IGKV6D-21A0A0A0MT36 114 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 CCDC194A0A1B0GVG4 234 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 FAM205CA6NFA0 338 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 CKBP12277 381 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 RBL2Q08999 1139 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 KRT40Q6A162 431 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 LMBR1Q8WVP7 490 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 AZI2Q9H6S1 392 aa25.85■■□□□ 1.73
IRF3-220ENST00000598108 ST18O60284 1047 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 KRT2P35908 639 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 STAT5BP51692 787 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 TRAF7Q6Q0C0 670 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 PLPPR4Q7Z2D5 763 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 DEFB128Q7Z7B8 93 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 SLC5A5Q92911 643 aa25.84■■□□□ 1.73
IRF3-220ENST00000598108 BTBD18B2RXH4 712 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 FGBP02675 491 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 MMP1P03956 469 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 SELPP16109 830 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 GUCY1B3Q02153 619 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 PPFIA1Q13136 1202 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 LETM2Q2VYF4 491 aa25.83■■□□□ 1.73
IRF3-220ENST00000598108 ZNF618Q5T7W0 954 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms